DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and SRF5

DIOPT Version :9

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_178019.2 Gene:SRF5 / 844238 AraportID:AT1G78980 Length:699 Species:Arabidopsis thaliana


Alignment Length:665 Identity:142/665 - (21%)
Similarity:254/665 - (38%) Gaps:191/665 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 LTNLEPVTTYTVQIHAINSVSHINEFKRHSNESSLVAVSDIVFSNTSL-LNIPLDLNEVK----- 516
            |:||:.:||:.:   :.|::.....::...|      ::::.||...| .|:|..|:::|     
plant    88 LSNLKSLTTFDL---SKNNLKGNIPYQLPPN------IANLDFSENELDGNVPYSLSQMKNLQSI 143

  Fly   517 -------TGQAEIVFTTESVLLSTVFNLRILA---------ITN------KDADLEWDKPVQSDF 559
                   .|:...:|...|.|.:..|:|..|:         :|:      :|.....|..|..:.
plant   144 NLGQNKLNGELPDMFQKLSKLETLDFSLNKLSGKLPQSFANLTSLKKLHLQDNRFTGDINVLRNL 208

  Fly   560 PLEFYEVR------WFPKVELDAINK-----SALNTKETKAHIVGLLENTEYGFQVR-CKTNNGF 612
            .::...|.      |.|. ||..|:.     :..:|:.......|:    :||.:.. .|...|.
plant   209 AIDDLNVEDNQFEGWIPN-ELKDIDSLLTGGNDWSTETAPPPPPGV----KYGRKSSGSKDGGGI 268

  Fly   613 GSYSNMIYAQTLQSVGSVYDDSVQIRFIAGAIVTGVLFLVIFIIATVYFMRSKHQDDL-----DK 672
            .:.:.|:                    ||||.: |||.|:|.:||.|    ||.:..|     |:
plant   269 TAGTGMV--------------------IAGACL-GVLVLIIVLIALV----SKKKSSLSPHFIDE 308

  Fly   673 KSTNHLP-------------LPLD----------------------------YASNEVNSMDTTP 696
            .:::|.|             |.:|                            |.|:.|.|...|.
plant   309 DNSHHTPKFKSLTSHGSAQELRVDFGNDYKDGKSGDSGDENIHRIGSKGLKHYVSSRVMSFTDTE 373

  Fly   697 IVKKLHLNVTTPLFGNSRSYVDPHTYEDPNQAIREFAREIDANYITIEAIIGGGEFGDVCRGRLK 761
            ...||:...||    ::||.|: ....|...|...|:   ..|      ::|.|..|.|.|.:  
plant   374 FANKLNAKRTT----STRSAVE-FELSDLQSATANFS---PGN------LLGEGSIGRVYRAK-- 422

  Fly   762 IPPNFVQDIDVAIKTLKPGSSEKARCDFLTEASI-MGQFDHPNVIYLQGVVTRSNPVMIITEYME 825
                :.....:|:|.:.....:..:.:.:|...: :.:..|.|:..|.|..:.....|::.||..
plant   423 ----YSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFR 483

  Fly   826 NGSLDTFLRVNDGKFQTLQLIVMLR---GIASGMSYLSDM---NYVHRDLAARNVLVNAQLICKI 884
            ||||..||.::|...:.|.....:|   |.|..:.||.:.   :.:|:::.:.|:|::|.|..::
plant   484 NGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLDADLNPRL 548

  Fly   885 ADFGLS----REIENASDAYTTRGGKIPVRWTAPEAIAFRKFTSASDVWSYGVVLWEVMS----- 940
            :|:|||    |..:|..:.|           .||||.....:|..|||:|:|||:.|:::     
plant   549 SDYGLSKFYLRTSQNLGEGY-----------NAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPF 602

  Fly   941 YGERP-----YWNWSNQ-----DVIKSIEKGYRLPA-----PMDCPEALYQLMLDCWQKQRTHRP 990
            .||:|     ...|:..     |.:.:|..    ||     |.........::..|.|.:...||
plant   603 DGEKPRPERSLVRWATPQLHDIDALSNIAD----PALHGLYPPKSLSRFADIIALCVQVEPEFRP 663

  Fly   991 TFASIVSTLDNLARQ 1005
            ..:.:|..|..:.::
plant   664 PMSEVVEALVRMVQR 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020 5/17 (29%)
FN3 536..623 CDD:238020 19/113 (17%)
EphA2_TM 644..736 CDD:291255 31/137 (23%)
PTKc_EphR 736..1002 CDD:270629 69/296 (23%)
Pkinase_Tyr 741..999 CDD:285015 67/288 (23%)
SAM_1 1033..1092 CDD:278937
SAM 1039..1092 CDD:197735
SRF5NP_178019.2 LRRNT_2 25..65 CDD:369783
leucine-rich repeat 70..93 CDD:275380 3/4 (75%)
PLN00113 <73..680 CDD:215061 142/665 (21%)
leucine-rich repeat 94..115 CDD:275380 3/23 (13%)
leucine-rich repeat 116..139 CDD:275380 6/22 (27%)
leucine-rich repeat 140..163 CDD:275380 2/22 (9%)
leucine-rich repeat 164..187 CDD:275380 4/22 (18%)
leucine-rich repeat 188..209 CDD:275380 3/20 (15%)
leucine-rich repeat 210..230 CDD:275380 5/20 (25%)
PKc_like 410..675 CDD:389743 68/285 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1804
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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