DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eph and AT1G73660

DIOPT Version :9

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_177507.1 Gene:AT1G73660 / 843701 AraportID:AT1G73660 Length:1030 Species:Arabidopsis thaliana


Alignment Length:744 Identity:181/744 - (24%)
Similarity:279/744 - (37%) Gaps:142/744 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 PCPPNSNASKTGSPFCKCASGFYRHPNDGRH--MPCYSPPAA--PTNLTLLFVDQTSAIISWSAP 410
            ||........|||.  ..|..|.: .:|||.  :.....|..  |.:...|.:|...:..| ::|
plant   343 PCRIVKGQQYTGSE--DVAMNFIK-ADDGREYIVDLMGDPGTLIPADAAGLQIDYDESAYS-ASP 403

  Fly   411 AKNESF-----------SSETNSKIYHSDIVYKIKCN------------ICSPNVVYNPSTDTFN 452
            ..|:|.           |.|.|::....:.....|.:            |..||:   ...|..|
plant   404 GDNDSIHVASSSNGIESSYEENTEFRTGEHRSSTKSSGERNQSGGGGDLIVHPNI---SREDVKN 465

  Fly   453 ETKITLTNLEPVTTYTVQIHAINSVSHINEFKRHSNESSLVA----VSDI--------------- 498
            :.|:     |......:....|:|.:|:.........||..|    |.|:               
plant   466 QKKV-----EKAPFQNLSSRPIHSFTHMRSPSWTEGVSSPAAQRMKVKDVSQYMIDAAKENPRLA 525

  Fly   499 -----VFSNTSLLNIPLDLNEVKTGQAEIVFTTESVLLSTVFNLRILAITNKDADLEWDKPVQSD 558
                 |...:.::..|...:||...|.|.  |.||...:.....|     .||.:...:...|:.
plant   526 QKLHDVLLESGVVAPPNLFSEVYPQQLEA--TVESKNSTEAKKER-----GKDLETTQEGRHQNG 583

  Fly   559 F-PLEFYEVRWFPKVELDAINKSALNTKETKAHIVGLLE-------NTEYGFQVRCKTNNGFGSY 615
            | |:.|...  .|:|:    :|:..:.:.....:|...:       :|||...|...........
plant   584 FGPVRFLPP--LPRVQ----SKTNAHDQRDNGKVVSQSDSSHSEASSTEYARTVPAAVAAAAVVA 642

  Fly   616 SNMIYAQTLQSVGSVYDDSVQIRFIAGAIVTGVLFLVIFIIATVYFMRSKH-----QDDLDKKST 675
            |:|:.|...:|..|   ||..|...|.|..|.....|:...|.|    |:.     ..|.|..|.
plant   643 SSMVAAAAAKSANS---DSSPIELPAAAAATATAAAVVATAAAV----SRQLELGSNSDGDDGSG 700

  Fly   676 NHLPLPLDYASNEVNSMDTTPIVKKLHLNVTTPLFGNSRSYVDPHTYEDPNQAIREFAREIDANY 740
            .|.|.....:::..||...         .::....||..|..|.....|         .||....
plant   701 GHEPQGSGDSNHGPNSGGE---------RISDKSIGNESSKSDCDDVSD---------CEILWEE 747

  Fly   741 ITIEAIIGGGEFGDVCRGRLKIPPNFVQDIDVAIKT-LKPGSSEKARCDFLTEASIMGQFDHPNV 804
            ||:...||.|.:|:|.||..       ...:||:|. |....:.:|..:|.:|..||.:..|||:
plant   748 ITVGERIGLGSYGEVYRGDW-------HGTEVAVKKFLDQDLTGEALEEFRSEVRIMKKLRHPNI 805

  Fly   805 IYLQGVVTRSNPVMIITEYMENGSLDTFLRVNDGKFQTLQLIVMLRGIASGMSYLSDMN--YVHR 867
            :...|.|||...:.|:||::..|||...:...:.:....:.:.|....|.||:||...|  .|||
plant   806 VLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHSCNPMIVHR 870

  Fly   868 DLAARNVLVNAQLICKIADFGLSR-----EIENASDAYTTRGGKIPVRWTAPEAIAFRKFTSASD 927
            ||.:.|:||:...:.|:.||||||     .:.:.|.|.|       ..|.|||.:.........|
plant   871 DLKSPNLLVDKNWVVKVCDFGLSRMKHSTYLSSKSTAGT-------AEWMAPEVLRNEPADEKCD 928

  Fly   928 VWSYGVVLWEVMSYGERPYWNWSNQDVIKSIEKGY---RLPAPMDCPEALYQLMLDCWQKQRTHR 989
            |:||||:|||:.:. ::|:...:...|:.::  |:   ||..|.....|:..|:..|||.....|
plant   929 VYSYGVILWELFTL-QQPWGKMNPMQVVGAV--GFQHRRLDIPDFVDPAIADLISKCWQTDSKLR 990

  Fly   990 PTFASIVSTLDNLARQPQSLLTTRPSPES 1018
            |:||.|:::|..|.:........||.|.|
plant   991 PSFAEIMASLKRLQKPVTGSNIPRPVPSS 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020 20/113 (18%)
FN3 536..623 CDD:238020 18/94 (19%)
EphA2_TM 644..736 CDD:291255 17/96 (18%)
PTKc_EphR 736..1002 CDD:270629 87/276 (32%)
Pkinase_Tyr 741..999 CDD:285015 85/268 (32%)
SAM_1 1033..1092 CDD:278937
SAM 1039..1092 CDD:197735
AT1G73660NP_177507.1 EDR1 179..383 CDD:316869 11/42 (26%)
STKc_MAP3K-like 754..1000 CDD:270901 83/262 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.