DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and AT1G56130

DIOPT Version :9

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_176009.1 Gene:AT1G56130 / 842065 AraportID:AT1G56130 Length:1032 Species:Arabidopsis thaliana


Alignment Length:1038 Identity:209/1038 - (20%)
Similarity:358/1038 - (34%) Gaps:331/1038 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 DCSLFPGNALSCKETFSLLFYEFDAATREPPPWQTDSYRLIARIAAGEG---------------- 214
            |||.  .|:..|:.| ::..|..|.....||...|.:|  :..:..|:.                
plant    90 DCSF--QNSTICRIT-NIKVYAIDVVGPIPPELWTLTY--LTNLNLGQNVLTGSLPPAIGNLTRM 149

  Fly   215 ---RFNQNS-------DVDINTEVKSIAVNKKGVYFAFRDQ-GACISVLAVKVYYITCPAVTE-- 266
               .|..|:       ::.:.|:::.:.::......:..|: |.|..   ::..||....::.  
plant   150 QWMTFGINALSGPVPKEIGLLTDLRLLGISSNNFSGSIPDEIGRCTK---LQQMYIDSSGLSGRI 211

  Fly   267 --NFAHFNETPTGREITIIEKQNGTCVDNAEPYETPTYLCKGDGKWTILTG----GCRCKAGYEP 325
              :||:           :::.:.....|.....:.|.::    |.||.||.    |.........
plant   212 PLSFAN-----------LVQLEQAWIADLEVTDQIPDFI----GDWTKLTTLRIIGTGLSGPIPS 261

  Fly   326 NYTNKT-CTECPLGTFKSPEVTKCTPCPPNSNASKTGSPFCKCASGFYRHPNDGRHMPCYSPPAA 389
            :::|.| .||..||...|               ..:...|.|...                    
plant   262 SFSNLTSLTELRLGDISS---------------GSSSLDFIKDMK-------------------- 291

  Fly   390 PTNLTLLFVDQTSAIISWSAPAKNESFSSETNSKIYHSDIVYKIKCNICSPNVVYNPSTDTFNET 454
              :|::|.:             :|.:.:....|.|.....:.::..:.   |.::.|       .
plant   292 --SLSVLVL-------------RNNNLTGTIPSTIGEHSSLRQVDLSF---NKLHGP-------I 331

  Fly   455 KITLTNLEPVTTYTVQIHAINSVSHINEF---KRHSNESSLVAVSDIVFSNTSLLNIP-LDLNEV 515
            ..:|.||..:|...:..:.:|     ..|   |..|..:..|:.:|:..|..|.:::| |.||.|
plant   332 PASLFNLSQLTHLFLGNNTLN-----GSFPTQKTQSLRNVDVSYNDLSGSLPSWVSLPSLKLNLV 391

  Fly   516 KTGQAEIVFTTESVLLSTVFNLRILAITN---KDADLEWDKPVQSDFPLEFYEVRWFPKVELDAI 577
            ...     ||.|.:      :.|:|...|   |:......|.:.|||                :|
plant   392 ANN-----FTLEGL------DNRVLPGLNCLQKNFPCNRGKGIYSDF----------------SI 429

  Fly   578 NKSALNTKETKAHIVGLL---ENTEYG---FQVR-----CKTNNG-FGSYSNMIYAQTLQS--VG 628
            |...    ..|..:.|.|   |:.::|   |.|.     ..::.| |...||.||..|.||  |.
plant   430 NCGG----PEKRSVTGALFEREDEDFGPASFFVSAGQRWAASSVGLFAGSSNNIYIATSQSQFVN 490

  Fly   629 SVYDDSVQ--------IRFIA-----GAIVTGVLFLVIFIIAT--------------VYFMRSKH 666
            ::..:..|        :|:..     |.....:.|..|.|:.:              :|......
plant   491 TLDSELFQSARLSASSVRYYGLGLENGGYTVTLQFAEIQILGSTSTTWKGLGRRRFDIYVQGRLV 555

  Fly   667 QDDLDKKST-------------------NHLPLPLDYASNE-------------VNSMDTTPIVK 699
            :.|.|.:.|                   |||.:.|.:|...             ::::..||...
plant   556 EKDFDVRRTAGDSTVRAVQRVYKANVSENHLEVHLFWAGKGTCCIPIQGAYGPLISAVSATPDFT 620

  Fly   700 KLHLNVTTPLFGNSRS------------------------------YVD----------PH--TY 722
            ....| ..|..|.:|:                              |.|          |:  ||
plant   621 PTVAN-KPPSKGKNRTGTIVGVIVGVGLLSILAGVVMFTIRKRRKRYTDDEELLGMDVKPYIFTY 684

  Fly   723 EDPNQAIREFAREIDANYITIEAIIGGGEFGDVCRGRLKIPPNFVQDID---VAIKTLKPGSSEK 784
            .:...|.::|.   .:|.      :|.|.||.|.:|.|.         |   ||:|.|..| |.:
plant   685 SELKSATQDFD---PSNK------LGEGGFGPVYKGNLN---------DGRVVAVKLLSVG-SRQ 730

  Fly   785 ARCDFLTEASIMGQFDHPNVIYLQGVVTRSNPVMIITEYMENGSLDTFLRVNDGKFQTLQLIVML 849
            .:..|:.|...:....|.|::.|.|........|::.||:.|||||..| ..|   :||.|....
plant   731 GKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQAL-FGD---KTLHLDWST 791

  Fly   850 R-----GIASGMSYL---SDMNYVHRDLAARNVLVNAQLICKIADFGLSREIENASDAYTTR-GG 905
            |     |:|.|:.||   :.:..||||:.|.|:|::::|:.:|:||||::..::.....:|| .|
plant   792 RYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAG 856

  Fly   906 KIPVRWTAPEAIAFRKFTSASDVWSYGVVLWEVMS---------YGERPY---WNWSNQDVIKSI 958
            .|  .:.|||.......|..:||:::|||..|::|         ..|:.|   |.|:..:..:.|
plant   857 TI--GYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDI 919

  Fly   959 EKGYRLPAPMDCPEA--LYQLMLDCWQKQRTHRPTFASIVSTLDNLARQPQSLLTTRPSPESD 1019
            |.........:..||  :..:.|.|.|.....||..:.:|:.|........  :|::|...||
plant   920 ELIDDKLTDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEIGD--VTSKPGYVSD 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439 20/120 (17%)
FN3 387..476 CDD:238020 11/88 (13%)
FN3 536..623 CDD:238020 23/101 (23%)
EphA2_TM 644..736 CDD:291255 25/179 (14%)
PTKc_EphR 736..1002 CDD:270629 83/291 (29%)
Pkinase_Tyr 741..999 CDD:285015 81/283 (29%)
SAM_1 1033..1092 CDD:278937
SAM 1039..1092 CDD:197735
AT1G56130NP_176009.1 leucine-rich repeat 125..148 CDD:275380 1/22 (5%)
leucine-rich repeat 149..172 CDD:275380 2/22 (9%)
leucine-rich repeat 173..196 CDD:275380 3/22 (14%)
leucine-rich repeat 197..244 CDD:275380 8/61 (13%)
leucine-rich repeat 221..242 CDD:275380 3/24 (13%)
leucine-rich repeat 245..268 CDD:275380 4/22 (18%)
leucine-rich repeat 269..292 CDD:275380 7/59 (12%)
leucine-rich repeat 293..316 CDD:275380 5/35 (14%)
leucine-rich repeat 317..340 CDD:275380 5/32 (16%)
leucine-rich repeat 341..362 CDD:275380 4/25 (16%)
Malectin 427..613 CDD:288557 35/205 (17%)
S_TKc 694..937 CDD:214567 77/267 (29%)
STKc_IRAK 700..962 CDD:270968 81/277 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1804
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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