DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and RHS6

DIOPT Version :9

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_175600.3 Gene:RHS6 / 841615 AraportID:AT1G51880 Length:898 Species:Arabidopsis thaliana


Alignment Length:1019 Identity:206/1019 - (20%)
Similarity:339/1019 - (33%) Gaps:348/1019 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 EIQFTIRDCSLFPGNALSCKETFSLLFYEFDA----------------ATREPPPWQTDSY---- 203
            ::.|...||.|.|.||...::|.::. |:.||                |..:...|...|:    
plant    44 QLGFISLDCGLVPKNATYTEKTTNIT-YKSDANYIDSGLVGRISAEYKAQLQQQTWTVRSFPEGE 107

  Fly   204 ------------RLIARIAAGEGRFN-----QNSDVDINTEVKSIAVNKKGVYFAFRDQGACISV 251
                        |.:.|.....|.::     ...|:.|... |..:|...||     ..||.:.:
plant   108 RNCYNFNLTAKSRYLIRATFTYGNYDGLRQVPKFDIHIGPS-KWTSVKLDGV-----GNGAVLEM 166

  Fly   252 LAVKVYYITCPAVTENFAHFNETPTGREITIIEK-------------QNGTCVDNAEPY--ETPT 301
            :.|         :|::........||:.|..|..             |:|:.:..|..:  .|||
plant   167 IHV---------LTQDRLQICLVKTGKGIPFISSLELRPLNNNTYLTQSGSLIGFARVFFSATPT 222

  Fly   302 YLCKG----DGKWTILTGGCRCKAGYEPNYTNKTCTECPLGT---FKSPEVTKCTPCPPNSNASK 359
            ::...    |..|....|          |......|:..:.|   :..|:....|.|.| ||||:
plant   223 FIRYDEDIHDRVWVRQFG----------NGLKSISTDLLVDTSNPYDVPQAVAKTACVP-SNASQ 276

  Fly   360 TGSPFCKCASGFYRHPNDGRHMPCYSPPAAPTNLTLLFVDQTSAIISWSAPAKNESFSSETNSKI 424
                                                      ..|..|:.    ::.:|:  |.:
plant   277 ------------------------------------------PLIFDWTL----DNITSQ--SYV 293

  Fly   425 Y-HSDIVYKIKCN-ICSPNVVYNPSTDTFNETK------ITLTNLEPVTTYTVQIHAINSVSHIN 481
            | |...:..:|.| |...|:.||...:.::..:      .||.:.:|::                
plant   294 YMHFAEIQTLKDNDIREFNITYNGGQNVYSYLRPEKFEISTLFDSKPLS---------------- 342

  Fly   482 EFKRHSNESSLVAVSDIVFSNTSLLNIP-----------LDLNEVKTGQAEIVFTTESVLLSTVF 535
                 |.:.|.    .:.|:.|....:|           |||.|::|.|.|:         |.:.
plant   343 -----SPDGSF----SLSFTKTGNSTLPPLINGLEIYKVLDLLELETDQDEV---------SAMI 389

  Fly   536 NLRILAITNKDADLEWDKPVQSDFPLEFYEVRWFPKVELDAINKSALNTKETKAHIVGLLENTEY 600
            |::  |..:....:.|    |.| |......:|      :.:|.|..|:.:.:...:.|.||...
plant   390 NIK--ATYDLSKKVSW----QGD-PCAPKSYQW------EGLNCSYPNSDQPRIISLNLAENKLT 441

  Fly   601 G------------FQVRCKTNNGFGSYS--------------NMIYAQTLQ---SVGSVYDDSVQ 636
            |            .::....|:..|...              |:...:.|.   .:.|...||:|
plant   442 GTITPEISKLTQLIELDLSKNDLSGEIPEFFADMKLLKLIKLNVFICRNLSGNLGLNSTIPDSIQ 506

  Fly   637 IRF------------------IAG-----------AIVTGVLFLVIFIIATVYFMRSKHQDDLDK 672
            .|.                  :.|           |.|.|| |.::.|:|..:.:|.|:.:  ..
plant   507 QRLDSKSLILILSKTVTKTVTLKGKSKKVPMIPIVASVAGV-FALLVILAIFFVVRRKNGE--SN 568

  Fly   673 KSTNHLPLPLDYASNEVNSMDTTPIVKKLHLNVTTPLFGNSRSYVDPHTYEDPNQAIREFAREID 737
            |.||                 .:.|.|:..:                 ||.:..:....|     
plant   569 KGTN-----------------PSIITKERRI-----------------TYPEVLKMTNNF----- 594

  Fly   738 ANYITIEAIIGGGEFGDVCRGRLKIPPNFVQDIDVAIKTLKPGSSEKARCDFLTEASIMGQFDHP 802
                  |.::|.|.||.|..|.|       :|..||:|.|...|::..: :|..|..::.:..|.
plant   595 ------ERVLGKGGFGTVYHGNL-------EDTQVAVKMLSHSSAQGYK-EFKAEVELLLRVHHR 645

  Fly   803 NVIYLQGVVTRSNPVMIITEYMENGSL-DTFLRVNDGKFQT----LQLIVMLRGIASGMSYLSD- 861
            |::.|.|.....:.:.:|.|||.||.| :.......|...|    :|:.|   ..|.|:.||.: 
plant   646 NLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAV---EAAQGLEYLHNG 707

  Fly   862 --MNYVHRDLAARNVLVNAQLICKIADFGLSRE--IENASDAYTTRGGKIPVRWTAPEAIAFRKF 922
              ...||||:...|:|:|.:...|:|||||||.  ::..|...|...|  ...:..||.......
plant   708 CTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAG--TPGYLDPEYYRTNWL 770

  Fly   923 TSASDVWSYGVVLWEVMS-------YGERPYWN-WSNQDVIKSIEKGY---RLPAPMDCPEA--L 974
            :..|||:|:||||.|:::       ..||.:.| |....:.|...|..   :|....|...|  :
plant   771 SEKSDVYSFGVVLLEIVTNQPVTDKTRERTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKI 835

  Fly   975 YQLMLDCWQKQRTHRPTFASIVS------TLDNLARQPQSLLTT 1012
            .:|.|.|.......|||.|.:|:      .|:|..||.:..:.|
plant   836 VELALACVNPSSNRRPTMAHVVTELNECVALENARRQGREEMHT 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439 26/137 (19%)
FN3 387..476 CDD:238020 15/96 (16%)
FN3 536..623 CDD:238020 17/112 (15%)
EphA2_TM 644..736 CDD:291255 16/91 (18%)
PTKc_EphR 736..1002 CDD:270629 82/294 (28%)
Pkinase_Tyr 741..999 CDD:285015 81/286 (28%)
SAM_1 1033..1092 CDD:278937
SAM 1039..1092 CDD:197735
RHS6NP_175600.3 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1804
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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