DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eph and AT1G29740

DIOPT Version :9

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_174267.4 Gene:AT1G29740 / 839852 AraportID:AT1G29740 Length:1078 Species:Arabidopsis thaliana


Alignment Length:1138 Identity:250/1138 - (21%)
Similarity:387/1138 - (34%) Gaps:369/1138 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SAFYKNQAPISEQNRSQIVSR-MSLLRTILLI--IISIHFKLAHADQVVLL-------------- 88
            ||.||    :...:||::.|. :|:|..|.|:  ::|....| |.|:|..|              
plant     2 SAAYK----LMIMSRSRLFSSLLSVLTLIYLVCTVLSASPSL-HPDEVEALKDIALTLGVKHLNL 61

  Fly    89 --DTTREATLEWTRYPYGPQAQTPGWVEESFTDFVK-GINWRSYVVCDVAYHNVNNWLWSPFIDR 150
              |.....||..|:                  |.:| |.|  |.:.||..::|            
plant    62 SEDPCLTKTLVITQ------------------DVLKEGQN--STIRCDCHFNN------------ 94

  Fly   151 GSANRLYIEIQFTIRDCSLFPGNALSCKETFSLLFY-EFDAATRE------PPPWQTDSY----- 203
              .|..:| ..|.::..|| ||.   ....||.|.| ||....|.      |..|.:..|     
plant    95 --NNTCHI-THFVLKTFSL-PGR---LPPEFSKLRYLEFIDLCRNYLYGSIPMEWASLPYLKSIS 152

  Fly   204 ----RLIARIAAGEGRF----------NQNSDVDINTEVKSIAVNKKGVYFA------------- 241
                ||...|..|.|:|          ||.|.. |..|:.:: ||.:|:.|:             
plant   153 VCANRLTGDIPKGLGKFINLTQLGLEANQFSGT-IPKELGNL-VNLEGLAFSSNQLVGGVPKTLA 215

  Fly   242 ---------FRDQ----------GACISVLAVKVYYI---------------------------- 259
                     |.|.          |....:..:::|..                            
plant   216 RLKKLTNLRFSDNRLNGSIPEFIGNLSKLQRLELYASGLKDPIPYSIFRLENLIDLRISDTAAGL 280

  Fly   260 -TCPAVTENFAHF----NETPTGREITII-EKQNGTCVD---NAEPYETP--------TYLCKG- 306
             ..|.:|.....|    |...||...|.: :..|...:|   |....|.|        |||... 
plant   281 GQVPLITSKSLKFLVLRNMNLTGPIPTSLWDLPNLMTLDLSFNRLTGEVPADASAPKYTYLAGNM 345

  Fly   307 -DGK---WTILTGGCRCKAGYEPNYT-NKTCTE-CPLGTFKSP----EVTKCTPCPPNSNASKTG 361
             .||   ...||........|. |:| :::|.| ..:.|:.|.    .:|:..||          
plant   346 LSGKVESGPFLTASTNIDLSYN-NFTWSQSCKERNNINTYASSRSTNSLTRLLPC---------- 399

  Fly   362 SPFCKCASGFYRHPNDGRHMPCYSPPAAPTNLTLLFV-DQTSAIISWSAP---AKNESFSSETNS 422
                 .|....::.|...|:.|..|.....|....|: :..:..::.||.   .||..||     
plant   400 -----SAINLCQNYNRSLHINCGGPDVTIENSRGRFLYEGDNYGLTGSATNYYGKNWGFS----- 454

  Fly   423 KIYHSDIVYKIKCNICSPNVVYNPSTDTFNETKITLTNLEPVTTYTVQIHAINSVSHINEFKRHS 487
                                    :|..|.:..||      ..||||...:..|..:.:.::...
plant   455 ------------------------NTGDFMDDAIT------EDTYTVSSESAVSAKYPDLYQNAR 489

  Fly   488 NESSLVAVSDIVFSNTSLLNIPLDLNEVKTGQAEIVFTTE---SVLLSTVFNLRILAITNKDADL 549
            .....:|...|.|.|.|.        .||...|||.|:.|   |.|...|||:.:      ...|
plant   490 RSPLSLAYFAICFENGSY--------NVKLHFAEIQFSDEEPFSRLAKRVFNIYV------QGKL 540

  Fly   550 EWDKPVQSDFPLEFYEVRWFPKVELDAINKSAL-NTKETKAHIVGLLENTEYGFQVRCKTNNGFG 613
            .|:     ||.:. .|.....|..:..:|.:.. ||.|.:.:..|      .|..:..|.    |
plant   541 IWE-----DFSIR-EEANGTHKEVIKEVNTTVTDNTLEIRLYWAG------KGTTIIPKR----G 589

  Fly   614 SYSNMIYA-QTLQSVGSVYDDSVQIRFIAGA--------IVTGVLFLVI----FIIATVYFMRSK 665
            :|.::|.| ....|..|.....|||..:...        ::.|:..|::    .|:..:|:....
plant   590 NYGSLISAISVCPSSESECGVPVQIHPVTKQQHKQRKYHLILGIAALIVSLSFLILGALYWRICV 654

  Fly   666 HQDDLDKKSTNHLPLPLDYASNEVNSMDTTPIVKKLHLNVTTPLFGNSRSYVDPHTYEDPNQAIR 730
            ...|.:|:.:..| ..|..|:::.|     |:.|                               
plant   655 SNADGEKRGSFSL-RQLKVATDDFN-----PLNK------------------------------- 682

  Fly   731 EFAREIDANYITIEAIIGGGEFGDVCRGRLKIPPNFVQDIDVAIKTLKPGSSEKARCDFLTEASI 795
                            ||.|.||.|.:|||   ||...   :|:|.|...|.:..: :|:.|..|
plant   683 ----------------IGEGGFGSVYKGRL---PNGTL---IAVKKLSSKSCQGNK-EFINEIGI 724

  Fly   796 MGQFDHPNVIYLQGVVTRSNPVMIITEYMENGSLDTFLRVNDG---KFQTLQLIVMLRGIASGMS 857
            :....|||::.|.|.......::::.||:||..|...|....|   .::|...|.:  |||.|::
plant   725 IACLQHPNLVKLYGCCVEKTQLLLVYEYLENNCLADALFGRSGLKLDWRTRHKICL--GIARGLA 787

  Fly   858 YL---SDMNYVHRDLAARNVLVNAQLICKIADFGLSREIENASDAYTTR-GGKIPVRWTAPEAIA 918
            :|   |.:..:|||:...|:|::..|..||:||||:|..|:.....||| .|.|  .:.|||...
plant   788 FLHEDSAVKIIHRDIKGTNILLDKDLNSKISDFGLARLHEDDQSHITTRVAGTI--GYMAPEYAM 850

  Fly   919 FRKFTSASDVWSYGVVLWEVMSYGERPYWNWSNQDVIKSIEKGY--------------RLPAPMD 969
            ....|..:||:|:|||..|::|......:...|:..:..::..:              :|....|
plant   851 RGHLTEKADVYSFGVVAMEIVSGKSNANYTPDNECCVGLLDWAFVLQKKGAFDEILDPKLEGVFD 915

  Fly   970 CPEA--LYQLMLDCWQKQRTHRPTFASIVSTLD 1000
            ..||  :.::.|.|..|..|.|||.:.:|..|:
plant   916 VMEAERMIKVSLLCSSKSPTLRPTMSEVVKMLE 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439 50/278 (18%)
FN3 387..476 CDD:238020 16/92 (17%)
FN3 536..623 CDD:238020 18/88 (20%)
EphA2_TM 644..736 CDD:291255 12/95 (13%)
PTKc_EphR 736..1002 CDD:270629 83/288 (29%)
Pkinase_Tyr 741..999 CDD:285015 82/280 (29%)
SAM_1 1033..1092 CDD:278937
SAM 1039..1092 CDD:197735
AT1G29740NP_174267.4 PLN00113 95..947 CDD:215061 220/1003 (22%)
leucine-rich repeat 124..147 CDD:275380 5/22 (23%)
leucine-rich repeat 148..171 CDD:275380 6/22 (27%)
leucine-rich repeat 172..195 CDD:275380 5/24 (21%)
leucine-rich repeat 196..219 CDD:275380 2/22 (9%)
leucine-rich repeat 220..243 CDD:275380 3/22 (14%)
leucine-rich repeat 244..267 CDD:275380 1/22 (5%)
leucine-rich repeat 268..314 CDD:275380 7/45 (16%)
leucine-rich repeat 338..358 CDD:275380 6/19 (32%)
Malectin 411..598 CDD:288557 53/251 (21%)
STKc_IRAK 683..947 CDD:270968 82/274 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1804
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.