DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and AT4G22730

DIOPT Version :9

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_194004.1 Gene:AT4G22730 / 828369 AraportID:AT4G22730 Length:688 Species:Arabidopsis thaliana


Alignment Length:714 Identity:151/714 - (21%)
Similarity:271/714 - (37%) Gaps:200/714 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 KCASGFYRHPN--DGRHMPCYSPPAAPTNLTL---LFVDQTSAIISWSAPAKNESFSSETNSKIY 425
            ||.||.|.|.|  .|      ..|...||||.   |:::..:  .|...||...|.:......:.
plant    92 KCLSGLYLHYNSLSG------EIPQEITNLTELSDLYLNVNN--FSGEIPADIGSMAGLQVMDLC 148

  Fly   426 HSDIVYKIKCNICS---PNVVYNPSTDTFNETKITLTNLEPVTTYTVQIHAINSVSHINEFKRHS 487
            .:.:..||..||.|   .||:.........|...||.||                          
plant   149 CNSLTGKIPKNIGSLKKLNVLSLQHNKLTGEVPWTLGNL-------------------------- 187

  Fly   488 NESSLVAVSDIVFSN------TSLLNIP----LDL-NEVKTG---------QAEIVFTTESVLLS 532
               |:::..|:.|:|      .:|.|||    ||| |...:|         .....|...:.|..
plant   188 ---SMLSRLDLSFNNLLGLIPKTLANIPQLDTLDLRNNTLSGFVPPGLKKLNGSFQFENNTGLCG 249

  Fly   533 TVF-NLRILAITNKDADLEWDKPVQSDFPLEFYEVRWFPKVELDAINKSALNTKETKAHIVGLLE 596
            ..| :||..:..:...::|..|.               |..|:|. :||||:......::     
plant   250 IDFPSLRACSAFDNANNIEQFKQ---------------PPGEIDT-DKSALHNIPESVYL----- 293

  Fly   597 NTEYGFQVRCKTNNGFGSYSNMIYAQTLQSVGSVYDDSVQIRFIAGAIVTGVLFLVIFIIATVYF 661
             .::..|..||.     |.|.:.....:.||     .:|.|..|...|:|              |
plant   294 -QKHCNQTHCKK-----SSSKLPQVALISSV-----ITVTITLIGAGILT--------------F 333

  Fly   662 MRSKHQDDLDKKSTNHLPLPLDYASNEVNS-----MDTTPIVKKLHLNVTTPLFGNSRSYV---- 717
            .|.:.:    |:..::.|   :::...:::     ...:|:|...:.....|| |:||:..    
plant   334 FRYRRR----KQKISNTP---EFSEGRLSTDQQKEFRASPLVSLAYTKEWDPL-GDSRNGAEFSQ 390

  Fly   718 DPHTY----------EDPNQAIREFAREIDANYITIEAIIGGGEFGDVCRGRLKIPPNFVQDIDV 772
            :||.:          ||...|.:.|:   :||      ::....|..|.:|.|:      ....|
plant   391 EPHLFVVNSSFRFNLEDIESATQCFS---EAN------LLSRNSFTSVFKGVLR------DGSPV 440

  Fly   773 AIKTLKPGSSEKARCDFLTEASIMGQFDHPNVIYLQGVVTR--SNPVMIITEYMENGSLDTFLRV 835
            ||:::...|.:....:|:....::....|.|::.|:|....  .....:|.::...|.|..||.:
plant   441 AIRSINISSCKNEEVEFMNGLKLLSSLSHENLVKLRGFCCSRGRGECFLIYDFASKGKLSNFLDL 505

  Fly   836 NDGKFQTL----QLIVMLRGIASGMSYL--SDM----NYVHRDLAARNVLVNAQLICKIADFGLS 890
            .:.:...:    ..|.:::|||.|::||  ||.    ..|||:::...:|::.|....|||.||.
plant   506 QERETNLVLAWSARISIIKGIAKGIAYLHGSDQQKKPTIVHRNISVEKILLDEQFNPLIADSGLH 570

  Fly   891 REIENASD-AYTTRGGKIPVRWTAPEAIAFRKFTSASDVWSYGVVLWEVMS-------------- 940
            ..:  |.| .::.......:.:.|||.:...|||..:|::::||::.:::|              
plant   571 NLL--ADDMVFSALKTSAAMGYLAPEYVTTGKFTEKTDIFAFGVIILQILSGKLMLTSSLRNAAE 633

  Fly   941 YGERPYWNWSNQDVIKSIEKGYRLPAPMDCPE--ALYQLMLDCWQKQRTHRPTFASIVSTLDNL 1002
            .||  :..:.::|:.:..:|          ||  |:.::.:.|.|:...:||   :|.:.|:|:
plant   634 NGE--HNGFIDEDLREEFDK----------PEATAMARIGISCTQEIPNNRP---NIETLLENI 682

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020 22/94 (23%)
FN3 536..623 CDD:238020 16/86 (19%)
EphA2_TM 644..736 CDD:291255 19/110 (17%)
PTKc_EphR 736..1002 CDD:270629 64/294 (22%)
Pkinase_Tyr 741..999 CDD:285015 61/286 (21%)
SAM_1 1033..1092 CDD:278937
SAM 1039..1092 CDD:197735
AT4G22730NP_194004.1 LRRNT_2 25..65 CDD:400522