DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eph and AT3G21340

DIOPT Version :9

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_188771.2 Gene:AT3G21340 / 821688 AraportID:AT3G21340 Length:899 Species:Arabidopsis thaliana


Alignment Length:757 Identity:170/757 - (22%)
Similarity:280/757 - (36%) Gaps:242/757 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   410 PAKNESFSSETNSKIYHSDIVYK-IKCNICSPNVV----YNPSTDTFNETKITLTNLE------- 462
            |.||.::::::.|..|.....:. ...||..|:.|    :.|..|....|::| |||.       
plant   182 PLKNNTYNTQSGSLKYFFRYYFSGSGQNIRYPDDVNDRKWYPFFDAKEWTELT-TNLNINSSNGY 245

  Fly   463 ------------PVTTY------------TVQIHAINSVSHI--------NEFK----------R 485
                        |::|:            |.|.:.....:.|        .|||          |
plant   246 APPEVVMASASTPISTFGTWNFSWLLPSSTTQFYVYMHFAEIQTLRSLDTREFKVTLNGKLAYER 310

  Fly   486 HSNESSLVAVSDIVFS-------NTSLLNIPLDLNEVKTGQAEIVFTTESVLLSTVFNLRILAI- 542
            :|.::  :|...|.:|       .|.||              |:..|.:|.|...:..|.:..: 
plant   311 YSPKT--LATETIFYSTPQQCEDGTCLL--------------ELTKTPKSTLPPLMNALEVFTVI 359

  Fly   543 ------TNKDADLEWDKPVQSDFPLEFYEVRW-----FPKVEL-DAINKSALNTKE--------- 586
                  ||.| |:...|.:||.:.|.  ::.|     .||..| :.:|.:.|:...         
plant   360 DFPQMETNPD-DVAAIKSIQSTYGLS--KISWQGDPCVPKQFLWEGLNCNNLDNSTPPIVTSLNL 421

  Fly   587 TKAHIVGL----LENTEYGFQVRCKTNNGFGSYSNMIYAQTLQSV------GSVYDDSVQ----- 636
            :.:|:.|:    ::|..:..::....||..|....  :...::|:      |:.::.|:.     
plant   422 SSSHLTGIIAQGIQNLTHLQELDLSNNNLTGGIPE--FLADIKSLLVINLSGNNFNGSIPQILLQ 484

  Fly   637 ---IRFI--------------------AGA--------IVTGVLFLVIFIIATVYFMRSKHQDDL 670
               ::.|                    .||        ||..|.|:|:...|..:|...|     
plant   485 KKGLKLILEGNANLICPDGLCVNKAGNGGAKKMNVVIPIVASVAFVVVLGSALAFFFIFK----- 544

  Fly   671 DKKSTNHLPL-PLDYAS-NEVNSMDTTPIVKKLHLNVTTPLFGNSRSYVDPHTYEDPNQAIREFA 733
            .||::|...| |..|.. :||.::.::          .:.:...:|.:    ||.:.......| 
plant   545 KKKTSNSQDLGPSSYTQVSEVRTIRSS----------ESAIMTKNRRF----TYSEVVTMTNNF- 594

  Fly   734 REIDANYITIEAIIGGGEFGDVCRGRLKIPPNFVQDIDVAIKTLKPGSSEKARCDFLTEASIMGQ 798
                      |.::|.|.||.|..|.:.   |..|   ||:|.|...||:..: :|..|..::.:
plant   595 ----------ERVLGKGGFGMVYHGTVN---NTEQ---VAVKMLSHSSSQGYK-EFKAEVELLLR 642

  Fly   799 FDHPNVIYLQGVVTRSNPVMIITEYMENGSLDTFLRVNDG----KFQT-LQLIVMLRGIASGMSY 858
            ..|.|::.|.|.......:.:|.|||.||.|...:....|    .::| |:::|   ..|.|:.|
plant   643 VHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVV---ESAQGLEY 704

  Fly   859 LSD---MNYVHRDLAARNVLVNAQLICKIADFGLSRE--IENASDAYTTRGGKIPVRWTAPEAIA 918
            |.:   ...||||:...|:|:|..|..|:|||||||.  ||..:...|...|  ...:..||...
plant   705 LHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAG--TPGYLDPEYYR 767

  Fly   919 FRKFTSASDVWSYGVVLWEVMSYGERPYWNWSNQDVI-KSIEK-------GYRLPAP-----MDC 970
            .......|||:|:|:||.|::          :||.|| :|.||       |..|...     || 
plant   768 TNWLNEKSDVYSFGIVLLEII----------TNQLVINQSREKPHIAEWVGLMLTKGDIQNIMD- 821

  Fly   971 PEALY------------QLMLDCWQKQRTHRPTFASIVSTLD 1000
            |: ||            :|.:.|.......|||.:.:|..|:
plant   822 PK-LYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQVVIELN 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020 20/101 (20%)
FN3 536..623 CDD:238020 21/112 (19%)
EphA2_TM 644..736 CDD:291255 20/93 (22%)
PTKc_EphR 736..1002 CDD:270629 87/300 (29%)
Pkinase_Tyr 741..999 CDD:285015 86/292 (29%)
SAM_1 1033..1092 CDD:278937
SAM 1039..1092 CDD:197735
AT3G21340NP_188771.2 Malectin_like 36..357 CDD:289580 37/191 (19%)
LRR_8 416..474 CDD:290566 8/59 (14%)
leucine-rich repeat 416..439 CDD:275380 3/22 (14%)
leucine-rich repeat 440..463 CDD:275380 3/24 (13%)
leucine-rich repeat 464..480 CDD:275380 2/15 (13%)
TyrKc 594..861 CDD:197581 87/301 (29%)
STKc_IRAK 598..863 CDD:270968 86/289 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1804
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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