DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and ror2

DIOPT Version :10

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_001015834.1 Gene:ror2 / 548551 XenbaseID:XB-GENE-491498 Length:930 Species:Xenopus tropicalis


Alignment Length:427 Identity:129/427 - (30%)
Similarity:194/427 - (45%) Gaps:93/427 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   648 VLFLVI------FIIATVYFM----RSK--------HQDDLDKKSTNHLPLPLDYASNEVNSMDT 694
            :|::::      .:||..:|:    |:|        .:..|....:..:.:||      :|....
 Frog   400 ILYILVPSIAIPLVIACFFFLVCMCRNKQKASASTPQRRQLMASPSQDMEMPL------MNQHKQ 458

  Fly   695 TPIVKKLHLNVTTPLFGNSRSYVDPHTYEDPNQAIREFAREIDANYITIEAIIGGGEFGDVCRGR 759
            .|.||:::|:..                        .|..|           :|...||.|.:|.
 Frog   459 QPKVKEINLSTV------------------------RFMEE-----------LGEDRFGKVYKGH 488

  Fly   760 LKIPPNFVQDIDVAIKTLKPGSSEKARCDFLTEASIMGQFDHPNVIYLQGVVTRSNPVMIITEYM 824
            |.......|...|||||||.......|.:|..||.:..:..|||::.|.|.||:..|:.::..|.
 Frog   489 LFGTTPGEQTQTVAIKTLKDKVEVALREEFKHEAMMRSRLQHPNIVCLIGTVTKEQPMSMVFSYS 553

  Fly   825 ENGSLDTFL----------RVNDGK-----FQTLQLIVMLRGIASGMSYLSDMNYVHRDLAARNV 874
            ....|..||          ..:|.|     .:....:.::..||:||.:||..:.||:|||||||
 Frog   554 PLSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPTDFLHIVTQIAAGMEFLSSHHVVHKDLAARNV 618

  Fly   875 LVNAQLICKIADFGLSREIENASDAYTTRGGK-IPVRWTAPEAIAFRKFTSASDVWSYGVVLWEV 938
            ||..:|..||:|.||.||: .|:|.|...|.. :|:||.:||||.:.|.:..||:|||||:|||:
 Frog   619 LVFDKLSVKISDLGLFREV-YAADYYKLMGNSMLPIRWMSPEAITYGKCSVDSDIWSYGVLLWEI 682

  Fly   939 MSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEALYQLMLDCWQKQRTHRPTFASI---VSTLD 1000
            .|||.:||..:||||||:.:.....|..|.|||..:|.|||:||.:....||.|..|   :.|.:
 Frog   683 FSYGLQPYCGYSNQDVIEMVRNRQVLLCPDDCPAWIYTLMLECWSEFPARRPRFKDIHTRLRTWE 747

  Fly  1001 NLAR--------------QPQSLLTTRPSPESDGNHI 1023
            |::.              |..||.|:..|..|:..::
 Frog   748 NMSNYNSSAQTSGASNTTQTSSLSTSPVSNVSNARYV 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020
FN3 536..623 CDD:238020
EphA2_TM 640..738 CDD:464211 16/107 (15%)
PTKc_EphR 736..1002 CDD:270629 106/284 (37%)
SAM_1 1029..1092 CDD:425739
ror2NP_001015834.1 I-set 62..150 CDD:400151
Ig strand B 77..81 CDD:409353
Ig strand C 90..94 CDD:409353
Ig strand E 116..120 CDD:409353
Ig strand F 130..135 CDD:409353
Ig strand G 143..146 CDD:409353
CRD_TK_ROR2 168..305 CDD:143577
KR 310..390 CDD:214527
Protein Kinases, catalytic domain 463..746 CDD:473864 109/318 (34%)
Blue background indicates that the domain is not in the aligned region.

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