DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and Csk

DIOPT Version :10

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster


Alignment Length:1144 Identity:245/1144 - (21%)
Similarity:389/1144 - (34%) Gaps:390/1144 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GIKSKTSSVTILTSVLNDAISALKSAFYKNQAPISEQNRSQIVSRMSLLRTILLIIISIHFKLAH 81
            |:....||||                 :|..:..:.....|::||......:|...:|..:....
  Fly   122 GLTRSASSVT-----------------HKEASTHATHTGGQVISRARRKPILLCSSLSAAYAPPR 169

  Fly    82 ADQVVLLDTTREATLEWTRYPYGPQAQTPGWVEESFTDFVKGINWRSYVVCDVAYHNVNNWLWSP 146
            ..:....|          :|..||...||.....|.|.               |.|..     ||
  Fly   170 RREFYFCD----------KYAPGPARSTPTTTTTSATS---------------AKHES-----SP 204

  Fly   147 FID------------RGSANRLYIEIQFTIRDCSLFPGN-----ALSCKETFSLL--------FY 186
            .||            :..|::...|:|.| :|  .|.||     :.:.::|...|        ::
  Fly   205 PIDARLLNFLRCAHRKFQASKAKTELQQT-KD--RFLGNSRERTSKNGQQTSRSLPPIASSEEWF 266

  Fly   187 EFDAATR--------EPPPWQTDSYR---LIARIAAGEGRFNQNSDVDINTEVKSIAVNKKGVYF 240
            :.:|..|        :|.|...::::   .|:|.|:|||..       |..|:|...:.|:    
  Fly   267 DEEAQARKTSHEKSQKPKPKPEENHKEKEAISRKASGEGDL-------ITVEIKQGLLRKQ---- 320

  Fly   241 AFRDQGACISVLAVKVYYITCPAVTENFAHFNETPTGREITIIEKQNGTCVDNAEPYETPTYLCK 305
                               |....|....:.:.|.|         |||.                
  Fly   321 -------------------TATTTTGQAMNSHATAT---------QNGQ---------------- 341

  Fly   306 GDGKWTILTGGCRCKAGYEPNYTNKTCTECPLGTFKSPEVTKCTPCPPNSNASKTGSPFCKCASG 370
                 |.:.|..|                    .|..|.||........|.|   |.|:....:|
  Fly   342 -----TTVVGHHR--------------------GFSQPSVTVAAAAATGSTA---GDPWFLQTTG 378

  Fly   371 FYRHPNDGRHMPCYSPPAAPTNLTLLFVDQTSAII----SWSAPAKNESFSSETNSKIYHSDIVY 431
                     |.   .||.||.........|.:|::    |.:||      .|...:.:.|...:.
  Fly   379 ---------HQ---MPPTAPLRHNKRPAPQPNAVLGAGSSGTAP------GSAVGAVLLHQQQLS 425

  Fly   432 KIKCNICSPNVVYNPSTDTFNETKITLTNLEPVTTYTVQIHAINSVSHINEFKRHSNES------ 490
            :.:.:|..|::  .|......|..:............:..||:||.:.|:....||.:|      
  Fly   426 QSQPHIVPPSI--PPHHHHHRENNVHPIQAGAAAALHLSSHALNSHNLISSASNHSPKSPSQTQQ 488

  Fly   491 -------------------------------------------SLVAVSDIVFSNTS-----LLN 507
                                                       :..||:.:......     |.|
  Fly   489 QQQTTNQQQQQQQQQASHSILSTFAPAPTVAAVQPAGSQSVAGTAAAVAAVAQQQQQQHLQLLAN 553

  Fly   508 IP--------LDLNEVKTGQ--AEIVFTTESVLLS-TVFNLRILAITNKDADLEWDKPVQSDFPL 561
            .|        ..||..:.|.  ||.....:|:.|| :.....:|..|.       .:|.|:..| 
  Fly   554 CPPGGAGLMSSSLNAAQMGMHGAERALPPKSLALSGSQHGSNMLLHTA-------PQPPQASQP- 610

  Fly   562 EFYEVRWFPKVELDAINKSALNTKETKAHIVGL-------LENTEYGFQVRCKTNNGFGSYSNMI 619
                                       |.:||:       :..:.:.|.:     ||..:.|.:.
  Fly   611 ---------------------------AAVVGVSGSGSAGMSTSLHSFDI-----NGVTAGSGVN 643

  Fly   620 YAQTLQSVGSVYDDSVQIRFIAGAIVTGVLFLVIFIIATVYFMRSKHQDD-------------LD 671
            .:....|..:...:...:...|.|...|.....:.:.|..:|..|..:|:             |.
  Fly   644 ASSAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQPREDGLFLV 708

  Fly   672 KKSTNHLPLPLDYA-----SNEVNSMDTTPIVKKLHLNVTTPLFGNSRSYVDPHTYEDPNQAIRE 731
            ::|||   .|.||.     .::|.......:..||.::             |...:|:..|.:..
  Fly   709 RESTN---FPGDYTLCVCFQSKVEHYRVKYLENKLTID-------------DEEYFENLGQLVAH 757

  Fly   732 FARE---------------------------IDANYITIEA------IIGGGEFGDVCRGRLKIP 763
            :..:                           :|..::..||      .||.||||||..|.|:  
  Fly   758 YEADADGLCTQLIKCLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGKGEFGDVMLGILR-- 820

  Fly   764 PNFVQDIDVAIKTLK-PGSSEKARCDFLTEASIMGQFDHPNVIYLQGVVTRSNPVMIITEYMENG 827
                 :..||:|.|| .|:.:|    ||.|||:|...:|.|::...|:|..|..:.::||||..|
  Fly   821 -----NEKVAVKMLKDEGAVQK----FLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKG 876

  Fly   828 SLDTFLRVNDGKFQTLQ-LIVMLRGIASGMSYLSDMNYVHRDLAARNVLVNAQLICKIADFGLSR 891
            ||..:||....:..|.: .|:.....||||.||.....|||||||||||::...:.|::||||:|
  Fly   877 SLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAR 941

  Fly   892 EIENASDAYTTRGGKIPVRWTAPEAIAFRKFTSASDVWSYGVVLWEVMSYGERPYWNWSNQDVIK 956
            |     :.|....||:|::||||||:...:|::.||:||:|::|||:.|:|..||......||:|
  Fly   942 E-----ECYNLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVK 1001

  Fly   957 SIEKGYRLPAPMDCPEALYQLMLDCWQKQRTHRPTFASI 995
            .:|.||::.||..||..:|::|...|......|||||.:
  Fly  1002 HVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAEL 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439 38/210 (18%)
FN3 387..476 CDD:238020 16/92 (17%)
FN3 536..623 CDD:238020 12/93 (13%)
EphA2_TM 640..738 CDD:464211 20/142 (14%)
PTKc_EphR 736..1002 CDD:270629 107/268 (40%)
SAM_1 1029..1092 CDD:425739
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 17/112 (15%)
PTKc_Csk_like 793..1047 CDD:270635 106/264 (40%)
Blue background indicates that the domain is not in the aligned region.

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