DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eph and Src42A

DIOPT Version :10

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_001400996.1 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1606 Species:Drosophila melanogaster


Alignment Length:278 Identity:123/278 - (44%)
Similarity:168/278 - (60%) Gaps:14/278 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   735 EIDANYITIEAIIGGGEFGDVCRGRLKIPPNFVQDIDVAIKTLKPGSSEKARCDFLTEASIMGQF 799
            |||...:.....:|.|:||||..|.      :.....|||||||.|:.:..  |||.||.||.:.
  Fly  1331 EIDRTSLKFVRKLGSGQFGDVWEGL------WNNTTPVAIKTLKSGTMDPK--DFLAEAQIMKKL 1387

  Fly   800 DHPNVIYLQGVVTRSNPVMIITEYMENGSLDTFLRVNDGKFQTLQ---LIVMLRGIASGMSYLSD 861
            .|..:|.|..|.|...|:.||||.|::|||..:|:...||.::|:   ||.|...||:||:||..
  Fly  1388 RHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAAQIAAGMAYLES 1452

  Fly   862 MNYVHRDLAARNVLVNAQLICKIADFGLSREIENASDAYTTR-GGKIPVRWTAPEAIAFRKFTSA 925
            .||:|||||||||||....|.|||||||:|.|:  .|.|..| |.:.|::||||||..:.||:..
  Fly  1453 QNYIHRDLAARNVLVGDGNIVKIADFGLARLIK--EDEYEARVGARFPIKWTAPEAANYSKFSIK 1515

  Fly   926 SDVWSYGVVLWEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEALYQLMLDCWQKQRTHRP 990
            |||||:|::|.|:::||..||...:|.:|:..:|.|||:|.|.:|...||::||:||.|....||
  Fly  1516 SDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYEIMLECWHKDPMRRP 1580

  Fly   991 TFASIVSTLDNLARQPQS 1008
            ||.::...|::.....||
  Fly  1581 TFETLQWKLEDFYTSDQS 1598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020
FN3 536..623 CDD:238020
EphA2_TM 640..738 CDD:464211 2/2 (100%)
PTKc_EphR 736..1002 CDD:270629 120/269 (45%)
SAM_1 1029..1092 CDD:425739
Src42ANP_001400996.1 SH2_Src_Src42 1210..1301 CDD:198233
PTKc_Frk_like 1328..1596 CDD:270653 121/274 (44%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.