DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and Ror

DIOPT Version :9

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_476962.1 Gene:Ror / 34367 FlyBaseID:FBgn0010407 Length:685 Species:Drosophila melanogaster


Alignment Length:738 Identity:198/738 - (26%)
Similarity:314/738 - (42%) Gaps:193/738 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 YSPPAAPTNLTLLFVDQTSAIISWSAPAKNESFSSETNSKIYHSDIVYKIKCNICSPNVVYN--- 445
            ||......:|.|||             .|.:..|...:|:||.    ::....||.   :||   
  Fly     4 YSAFIVCISLVLLF-------------TKKDVGSHNVDSRIYG----FQQSSGICH---IYNGTI 48

  Fly   446 -----PSTDTFNETKITLTNLEPVTTYTVQIHAINSVSHINEFKRHSNESSLVAVSDIVFSN--- 502
                 .:...|....:|:.:||.      ::.|...|  |.|.|..:....:.|:..:.||:   
  Fly    49 CRDVLSNAHVFVSPNLTMNDLEE------RLKAAYGV--IKESKDMNANCRMYALPSLCFSSMPI 105

  Fly   503 ------TSLL---NIPLDLNEVK--------TGQAEI----VFTTESVLLSTVFNLRILA----- 541
                  |:||   |:..:..::|        |...:|    :|..:|.:...||:..|.:     
  Fly   106 CRTPERTNLLYFANVATNAKQLKNVSIRRKRTKSKDIKNISIFKKKSTIYEDVFSTDISSKYPPT 170

  Fly   542 --------ITNKDADLEWDKPVQSDFPLEFYEVRWFPKVELDAINKSALNTKETKAHIVGL---L 595
                    |..::.:|..::..|.::.:    .:..|.:.:..:.......:......:|:   :
  Fly   171 RESENLKRICREECELLENELCQKEYAI----AKRHPVIGMVGVEDCQKLPQHKDCLSLGITIEV 231

  Fly   596 ENTEYGFQVRCKTNNGFGSYS--------------------NMIYAQTLQSVGSV------YDDS 634
            :.||..:.....|..|..:.|                    .:|.....::.|||      :.||
  Fly   232 DKTENCYWEDGSTYRGVANVSASGKPCLRWSWLMKEISDFPELIGQNYCRNPGSVENSPWCFVDS 296

  Fly   635 VQIRFI-------------------AGAIVTGVLFLVIFIIATVYFMRSKHQDDLDKKSTNHLPL 680
            .:.|.|                   ..||:  ::|::||  |.:.|.|         ::..|..:
  Fly   297 SRERIIELCDIPKCADKIWIAIVGTTAAII--LIFIIIF--AIILFKR---------RTIMHYGM 348

  Fly   681 PLDYASNEVNSMDTTPIVKKLHLNVTTP-----LFGNSRSYVDPHTYEDP--------------N 726
                              :.:| |:.||     ::|||:.    :..:|.              |
  Fly   349 ------------------RNIH-NINTPSADKNIYGNSQL----NNAQDAGRGNLGNLSDHVALN 390

  Fly   727 QAIREFAREIDANYITIEAI-----IGGGEFGDVCRGRLKIPPNFVQDIDVAIKTLKPGSSEKAR 786
            ..:.|....:..|:.|::.:     :|.|.||.|.:|:| :.|| ...|.||||.||..:|.|.:
  Fly   391 SKLIERNTLLRINHFTLQDVEFLEELGEGAFGKVYKGQL-LQPN-KTTITVAIKALKENASVKTQ 453

  Fly   787 CDFLTEASIMGQFDHPNVIYLQGVVTRSNPVMIITEYMENGSLDTFLRVN---DGK-FQTLQLIV 847
            .||..|..::....|.|::.:.|||....|..::.|||.||.|..||..|   :|| ...|:.:.
  Fly   454 QDFKREIELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSPTEGKSLSQLEFLQ 518

  Fly   848 MLRGIASGMSYLSDMNYVHRDLAARNVLVNAQLICKIADFGLSREIENASDAYTTRG-GKIPVRW 911
            :...|:.||.|||..:||||||||||.|||..|:.||:||||||:| .:||.|..:. ..:||||
  Fly   519 IALQISEGMQYLSAHHYVHRDLAARNCLVNEGLVVKISDFGLSRDI-YSSDYYRVQSKSLLPVRW 582

  Fly   912 TAPEAIAFRKFTSASDVWSYGVVLWEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEALYQ 976
            ...|:|.:.|||:.|||||:||||||:.|||.:||:.:|||:||..|.....|.||.:||.|:|.
  Fly   583 MPSESILYGKFTTESDVWSFGVVLWEIYSYGMQPYYGFSNQEVINLIRSRQLLSAPENCPTAVYS 647

  Fly   977 LMLDCWQKQRTHRPTFASIVSTL 999
            ||::||.:|...||||..|.:.|
  Fly   648 LMIECWHEQSVKRPTFTDISNRL 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020 18/96 (19%)
FN3 536..623 CDD:238020 12/122 (10%)
EphA2_TM 644..736 CDD:291255 18/110 (16%)
PTKc_EphR 736..1002 CDD:270629 122/274 (45%)
Pkinase_Tyr 741..999 CDD:285015 120/267 (45%)
SAM_1 1033..1092 CDD:278937
SAM 1039..1092 CDD:197735
RorNP_476962.1 CRD_TK_ROR_like 39..228 CDD:143568 33/203 (16%)
KR 235..312 CDD:214527 12/76 (16%)
PTKc_Ror 404..673 CDD:270642 121/270 (45%)
Pkinase_Tyr 410..670 CDD:285015 119/262 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455341
Domainoid 1 1.000 165 1.000 Domainoid score I1208
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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