DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and Ror

DIOPT Version :10

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_476962.1 Gene:Ror / 34367 FlyBaseID:FBgn0010407 Length:685 Species:Drosophila melanogaster


Alignment Length:738 Identity:198/738 - (26%)
Similarity:314/738 - (42%) Gaps:193/738 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 YSPPAAPTNLTLLFVDQTSAIISWSAPAKNESFSSETNSKIYHSDIVYKIKCNICSPNVVYN--- 445
            ||......:|.|||             .|.:..|...:|:||.    ::....||.   :||   
  Fly     4 YSAFIVCISLVLLF-------------TKKDVGSHNVDSRIYG----FQQSSGICH---IYNGTI 48

  Fly   446 -----PSTDTFNETKITLTNLEPVTTYTVQIHAINSVSHINEFKRHSNESSLVAVSDIVFSN--- 502
                 .:...|....:|:.:||.      ::.|...|  |.|.|..:....:.|:..:.||:   
  Fly    49 CRDVLSNAHVFVSPNLTMNDLEE------RLKAAYGV--IKESKDMNANCRMYALPSLCFSSMPI 105

  Fly   503 ------TSLL---NIPLDLNEVK--------TGQAEI----VFTTESVLLSTVFNLRILA----- 541
                  |:||   |:..:..::|        |...:|    :|..:|.:...||:..|.:     
  Fly   106 CRTPERTNLLYFANVATNAKQLKNVSIRRKRTKSKDIKNISIFKKKSTIYEDVFSTDISSKYPPT 170

  Fly   542 --------ITNKDADLEWDKPVQSDFPLEFYEVRWFPKVELDAINKSALNTKETKAHIVGL---L 595
                    |..::.:|..::..|.::.:    .:..|.:.:..:.......:......:|:   :
  Fly   171 RESENLKRICREECELLENELCQKEYAI----AKRHPVIGMVGVEDCQKLPQHKDCLSLGITIEV 231

  Fly   596 ENTEYGFQVRCKTNNGFGSYS--------------------NMIYAQTLQSVGSV------YDDS 634
            :.||..:.....|..|..:.|                    .:|.....::.|||      :.||
  Fly   232 DKTENCYWEDGSTYRGVANVSASGKPCLRWSWLMKEISDFPELIGQNYCRNPGSVENSPWCFVDS 296

  Fly   635 VQIRFI-------------------AGAIVTGVLFLVIFIIATVYFMRSKHQDDLDKKSTNHLPL 680
            .:.|.|                   ..||:  ::|::||  |.:.|.|         ::..|..:
  Fly   297 SRERIIELCDIPKCADKIWIAIVGTTAAII--LIFIIIF--AIILFKR---------RTIMHYGM 348

  Fly   681 PLDYASNEVNSMDTTPIVKKLHLNVTTP-----LFGNSRSYVDPHTYEDP--------------N 726
                              :.:| |:.||     ::|||:.    :..:|.              |
  Fly   349 ------------------RNIH-NINTPSADKNIYGNSQL----NNAQDAGRGNLGNLSDHVALN 390

  Fly   727 QAIREFAREIDANYITIEAI-----IGGGEFGDVCRGRLKIPPNFVQDIDVAIKTLKPGSSEKAR 786
            ..:.|....:..|:.|::.:     :|.|.||.|.:|:| :.|| ...|.||||.||..:|.|.:
  Fly   391 SKLIERNTLLRINHFTLQDVEFLEELGEGAFGKVYKGQL-LQPN-KTTITVAIKALKENASVKTQ 453

  Fly   787 CDFLTEASIMGQFDHPNVIYLQGVVTRSNPVMIITEYMENGSLDTFLRVN---DGK-FQTLQLIV 847
            .||..|..::....|.|::.:.|||....|..::.|||.||.|..||..|   :|| ...|:.:.
  Fly   454 QDFKREIELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSPTEGKSLSQLEFLQ 518

  Fly   848 MLRGIASGMSYLSDMNYVHRDLAARNVLVNAQLICKIADFGLSREIENASDAYTTRG-GKIPVRW 911
            :...|:.||.|||..:||||||||||.|||..|:.||:||||||:| .:||.|..:. ..:||||
  Fly   519 IALQISEGMQYLSAHHYVHRDLAARNCLVNEGLVVKISDFGLSRDI-YSSDYYRVQSKSLLPVRW 582

  Fly   912 TAPEAIAFRKFTSASDVWSYGVVLWEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEALYQ 976
            ...|:|.:.|||:.|||||:||||||:.|||.:||:.:|||:||..|.....|.||.:||.|:|.
  Fly   583 MPSESILYGKFTTESDVWSFGVVLWEIYSYGMQPYYGFSNQEVINLIRSRQLLSAPENCPTAVYS 647

  Fly   977 LMLDCWQKQRTHRPTFASIVSTL 999
            ||::||.:|...||||..|.:.|
  Fly   648 LMIECWHEQSVKRPTFTDISNRL 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020 18/96 (19%)
FN3 536..623 CDD:238020 12/122 (10%)
EphA2_TM 640..738 CDD:464211 20/135 (15%)
PTKc_EphR 736..1002 CDD:270629 122/274 (45%)
SAM_1 1029..1092 CDD:425739
RorNP_476962.1 CRD_TK_ROR_like 39..228 CDD:143568 33/203 (16%)
KR 235..312 CDD:214527 12/76 (16%)
PTKc_Ror 404..673 CDD:270642 121/270 (45%)
Blue background indicates that the domain is not in the aligned region.

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