DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and ek1

DIOPT Version :10

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_571170.1 Gene:ek1 / 30311 ZFINID:ZDB-GENE-990415-58 Length:981 Species:Danio rerio


Alignment Length:1045 Identity:431/1045 - (41%)
Similarity:590/1045 - (56%) Gaps:148/1045 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DQVVLLDT-TREATLEWTRYPYGPQAQTPGWVEESFTDFVKGINWRSYVVCDVAYHNVNNWLWSP 146
            ::|.|||: :....|.|..||      :.||.|.|..| .:.|..|:|.||:|...|.||||.:.
Zfish    28 NEVTLLDSMSAPGDLGWEAYP------SEGWEEISVMD-ERNIPMRTYQVCNVMEANQNNWLRTG 85

  Fly   147 FIDRGSANRLYIEIQFTIRDCSLFPGNALSCKETFSLLFYEFDAATREPPPWQTDS-YRLIARIA 210
            .|.|..|.|:|:||:||:|||:..||...:|||||::.::|.:.|...|.....:| |..|..||
Zfish    86 LIQREGAQRVYVEIKFTLRDCNSLPGVPGTCKETFNVYYHESNNAVAAPLRHIRESQYIKIDTIA 150

  Fly   211 AGEGRFNQNSDVD----INTEVKSIA-VNKKGVYFAFRDQGACISVLAVKVYYITCPAVTENFAH 270
            |.|. |.|....|    :||||:.|: ::|:|:|.||:|.||||::::|:|:|..||....|.|.
Zfish   151 ADES-FTQTDVGDRVMKLNTEVRDISGLSKRGLYLAFQDLGACIALVSVRVFYKRCPLAVLNLAR 214

  Fly   271 FNETPTGREITIIEKQNGTCVDNAEPYETPTYLCKGDGKWTILTGGCRCKAGYEPNYTNKTCTEC 335
            |.:|.||.:..::|.: ||||::||..|.|...|..||.|.:..|.|.|:.|:|.  .:..|..|
Zfish   215 FPDTVTGGDSALVEVR-GTCVEDAEELEGPRMFCSADGGWLVPIGRCVCRPGFEE--VDGHCQPC 276

  Fly   336 PLGTFKSPEV-TKCTPCPPNSNASKTGSPFCKCASGFYRHPNDGRHMPCYSPPAAPTNLTLLFVD 399
            ..|.:|:..: ..|..|||:|.:.:..:..|.|..||||..:|.|.|.|..||:||.| .:..|:
Zfish   277 RSGFYKASAMDAYCVKCPPHSYSHQDKASECVCERGFYRAESDPRSMACTRPPSAPGN-PISMVN 340

  Fly   400 QTSAIISWSAPAKNESFSSETNSKIYHSDIVYKIKCNICS-------------PNVVYNPSTDTF 451
            :|:..:.||.|..:..          ..|:.|.:.|..||             ....:||.....
Zfish   341 ETAVTLEWSPPRDSGG----------RGDVSYSVHCRKCSGETGASERCVPCGSGAHFNPRQFGL 395

  Fly   452 NETKITLTNLEPVTTYTVQIHAINSVSHINEFKRHSNESSLVAVSDIVFSNTSLLNIPLDLNEVK 516
            ...::.:|.|:|.|.||..:.|:|.||.::...|     .||:|:                  |.
Zfish   396 THPRVLVTELQPHTNYTFSVEALNGVSDLSPSPR-----QLVSVN------------------VT 437

  Fly   517 TGQAEIVFTTESVLLSTVFNLRILAITNKDAD---LEWDKPVQSDFPLEFYEVRWFPKVELDAIN 578
            |.|      |.||:|.          ..|..|   |.|..|...|..:..|||.::.|.:.|. |
Zfish   438 TSQ------TVSVILK----------ERKGTDSVTLAWQGPEPVDGTVVEYEVTYYEKNQQDQ-N 485

  Fly   579 KSALNTKETKAHIVGLLENTEYGFQVRCKTNNGFGSYSNMIYAQT----LQSVGSVYDDSVQIRF 639
            .:.|.||.....:.||...|.|.|:||.:|:.|:|:|...|..:|    :.:||.....::....
Zfish   486 YTVLKTKSNSMTVDGLKPGTTYIFRVRARTDGGYGNYKGEIELETSHEDMLAVGDPNQQTILAIS 550

  Fly   640 IAGAIVTGVLFLVIFIIA--TVYFMRSKHQDDLDKKSTNH--LPLPLDYASNEVNSMDTTPIVKK 700
            :||..|..||.:..||::  ...::::|...:.:|....|  :.||                   
Zfish   551 VAGGAVLLVLLVACFIVSGRRCGYIKAKQDPEEEKMQFQHGRVKLP------------------- 596

  Fly   701 LHLNVTTPLFGNSRSYVDPHTYEDPNQAIREFAREIDANYITIEAIIGGGEFGDVCRGRLKIPPN 765
                       .:|:|:.||||||||||:|:||:||:.:.|.||.:||.||||:||.|||::|..
Zfish   597 -----------ETRTYIHPHTYEDPNQAVRDFAKEIEVSNIRIERVIGAGEFGEVCSGRLRLPSK 650

  Fly   766 FVQDIDVAIKTLKPGSSEKARCDFLTEASIMGQFDHPNVIYLQGVVTRSNPVMIITEYMENGSLD 830
              ::|.||||:||.|.||..|.|||:||||||||||||:|.|:|||||..||||:||||||||||
Zfish   651 --REIQVAIKSLKAGYSEHQRRDFLSEASIMGQFDHPNIIRLEGVVTRCKPVMIVTEYMENGSLD 713

  Fly   831 TFLRVNDGKFQTLQLIVMLRGIASGMSYLSDMNYVHRDLAARNVLVNAQLICKIADFGLSREIEN 895
            |||:.:||:|..:||:.||||||:||.|||:||||||||||||:|||..|:||::||||||.:|:
Zfish   714 TFLKKHDGQFTVIQLLGMLRGIAAGMQYLSEMNYVHRDLAARNILVNRNLVCKVSDFGLSRVLED 778

  Fly   896 ASD-AYTTRGGKIPVRWTAPEAIAFRKFTSASDVWSYGVVLWEVMSYGERPYWNWSNQDVIKSIE 959
            ..: ||||||||||:||||||||.:|||||||||||||:|:|||:||||||||..|||||||:::
Zfish   779 DPEAAYTTRGGKIPIRWTAPEAITYRKFTSASDVWSYGIVMWEVISYGERPYWEMSNQDVIKAVD 843

  Fly   960 KGYRLPAPMDCPEALYQLMLDCWQKQRTHRPTFASIVSTLDNLARQPQSLLTTRPS--------P 1016
            :|||||||||||..|:|||||||:|.|:.||.|..||:|||.|.|.|.||.....|        |
Zfish   844 EGYRLPAPMDCPVVLHQLMLDCWEKNRSDRPKFGQIVNTLDRLIRNPSSLKQLANSAVWEDPVTP 908

  Fly  1017 ESDGNHILDGQRGQNIFISTDLWLEHIKMSRYCHHFKEANLINAQQISRLTAQQLSDMGITLVGH 1081
            |:..|.:.|             ||:.|||.:|..||..|..:....:..:::.:|..||:.|.||
Zfish   909 EAAVNTVED-------------WLDLIKMGQYKEHFSSAGYVTLDSVLYVSSSELDKMGVELAGH 960

  Fly  1082 QKKIL 1086
            |||||
Zfish   961 QKKIL 965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439 74/181 (41%)
FN3 387..476 CDD:238020 23/101 (23%)
FN3 536..623 CDD:238020 27/89 (30%)
EphA2_TM 640..738 CDD:464211 29/101 (29%)
PTKc_EphR 736..1002 CDD:270629 186/266 (70%)
SAM_1 1029..1092 CDD:425739 20/58 (34%)
ek1NP_571170.1 EphR_LBD_A 29..204 CDD:198441 74/182 (41%)
FN3 <326..>563 CDD:442628 73/287 (25%)
fn3 451..522 CDD:394996 24/71 (34%)
EphA2_TM 547..623 CDD:464211 29/105 (28%)
PTKc_EphR_A 621..887 CDD:270651 186/267 (70%)
SAM_EPH-R 911..971 CDD:188887 22/68 (32%)
PDZ-binding. /evidence=ECO:0000255 979..981
Blue background indicates that the domain is not in the aligned region.

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