DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and Epha10

DIOPT Version :9

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:XP_038965557.1 Gene:Epha10 / 298528 RGDID:1562679 Length:1061 Species:Rattus norvegicus


Alignment Length:1115 Identity:358/1115 - (32%)
Similarity:530/1115 - (47%) Gaps:200/1115 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 ADQVVLLDT-TREATLEWTRYPYGPQAQTPGWVEESFTDFVKGIN-----WRSYVVCDVAYHNVN 140
            |::|.|||: ..:|.|.||..|      :.||.|      :.|::     .|:|.||:|...|.:
  Rat    33 AEEVTLLDSKASQAELGWTALP------STGWEE------ISGVDEHDRPIRTYQVCNVLEPNQD 85

  Fly   141 NWLWSPFIDRGSANRLYIEIQFTIRDCSLFPGNALSCKETFSLLFYEFDA-ATREPPPWQTDSYR 204
            |||.:.:|.||...|:::|:|||:||||..||...:|||||:..:.|.:| ..|..|....:..|
  Rat    86 NWLQTGWISRGRGQRIFVELQFTLRDCSSIPGATGTCKETFNAYYLETEADLGRGHPHLGGNRPR 150

  Fly   205 LIARIAAGEGRFNQNS----DVDINTEVKSIA-VNKKGVYFAFRDQGACISVLAVKVYYITCPAV 264
            .|..|||.|. |.|..    .:.:||||:.|. ::::|.:.||:|.|||:::::|:|||..|.|.
  Rat   151 KIDTIAADES-FTQGDLGERKMKLNTEVREIGPLSRQGFHLAFQDVGACVALVSVRVYYKQCRAT 214

  Fly   265 TENFAHFNETPTGREITIIEKQNGTCV--DNAEPYETPTYLCKGDGKWTILTGGCRCKAGYEPNY 327
            ....|.|..|......:.:.:..||||  ...||...|...|..||:|.:..|.|.|.||::.. 
  Rat   215 VRGLAAFPATAAESAFSTLVEVAGTCVAHSEGEPSSPPRMHCGADGEWLVPVGRCSCSAGFQER- 278

  Fly   328 TNKTCTECPLGTFK-SPEVTKCTPCPPNSNASKTGSPFCKCASGFYRHPNDGRHMPCYSPPAAPT 391
             ...|..||.|.:| ||....|:|||.:|.|.:..|.||.|...:.|.|.|.....|..||:||.
  Rat   279 -GDICEACPPGFYKVSPRRPLCSPCPEHSLALENASTFCVCQDTYARSPTDPPSASCTRPPSAPR 342

  Fly   392 NLTLLFVDQTSAI-ISWSAPAKNESFSSETNSKIYHSDIVYKI------------KCNICSPNVV 443
            :|.........|: :.|..|..:..          .||:.|.:            .|..|.|.|.
  Rat   343 DLQYSLSRSPLALRLRWLPPEDSGG----------RSDVTYSLLCLRCGRDGPAGACQPCGPRVA 397

  Fly   444 YNPSTDTFNETKITLTNLEPVTTYTVQIHAINSVSHINEFKRHSNESSLVAVSDIVFSNTSLL-- 506
            :.|......|...||.:|.|...|||::.|:|.|            |...|.:...::..::.  
  Rat   398 FVPRQAGLRERAATLLHLRPGARYTVRVAALNGV------------SGPAAAAGATYAQVTVSTG 450

  Fly   507 -NIPLDLNEVKTGQAEIVFTTESVLLSTVFNLRILAITNKDADLEWDKPV---QSDFPLEFYEVR 567
             ..|.:.:|::..:.|    .:||.||                  |.:||   .|......||:|
  Rat   451 PGAPWEEDEIRRDRVE----PQSVSLS------------------WREPVPAGASGTNRTEYEIR 493

  Fly   568 WFPKVELDAINKSALNTKETKAHIVGLLENTEYGFQVRCKTNN---GFGSYSNMIYAQTLQSV-- 627
            ::.|.:.:. ..|.:.|......:..|...|.|.||:|..:..   ...|:|..|..||...|  
  Rat   494 YYEKGQSEQ-TYSTVKTGAPAVTVTNLKPATRYVFQIRAASPGPSWEAQSFSPSIEVQTPGEVAP 557

  Fly   628 GSVYDDSVQIRFIAGAIVTGVLFLVIFIIATVYFMRSKHQDDLDKKSTNHLPLPLDYASNEVNSM 692
            || .|.|..:      :||.|....:.::.:|..:.:..:...|.|.:.             |:.
  Rat   558 GS-RDQSPAV------VVTVVTISALLVLGSVMSVLAIWRRPCDGKGSG-------------NAH 602

  Fly   693 DTTPIVKKLHLNVTTPLFGNSRSYVDPHTYEDPNQAIREFAREIDANYITIEAIIGGGEFGDVCR 757
            |...:.  .|..|.|     .|:::||.:..||.||:..||:|:||..:|:|..:|.|.|||:|.
  Rat   603 DEEELY--FHFKVPT-----RRTFLDPQSCGDPLQAVHLFAKELDAKSVTLEKSLGAGRFGDLCC 660

  Fly   758 GRLKIPPNFVQDIDVAIKTLKPGSSEKARCDFLTEASIMGQFDHPNVIYLQGVVTRSNPVMIITE 822
            |.|::|..  |::.||:.||:.|.|:..:..||.||..:|||||.:::.|:|||||.||:||:||
  Rat   661 GCLQLPGR--QELPVAVHTLREGCSDSQKLSFLAEALTLGQFDHSHIVRLEGVVTRGNPLMIVTE 723

  Fly   823 YMENGSLDTFLRVNDGKFQTLQLIVMLRGIASGMSYLSDMNYVHRDLAARNVLVNAQLICKIADF 887
            ||..|:||.|||.::.:..|.||:.:|.|:||.|.|||:|.||||.||||.||:::.|||||:.|
  Rat   724 YMNLGALDDFLRHHEAELVTAQLMGLLPGLASAMKYLSEMGYVHRGLAARRVLLSSGLICKISGF 788

  Fly   888 GLSREIENASDAYTTR------------------------------------------------- 903
            |.... :.|...|||.                                                 
  Rat   789 GRGPR-DRAEAVYTTMVRSSLLWPHMLLLLSAIPTGPMVYILALPPSLPGLFPLVVPCLSQPGSF 852

  Fly   904 -----GGKIPVRWTAPEAIAFRKFTSASDVWSYGVVLWEVMSYGERPYWNWSNQDVIKSIEKGYR 963
                 .|:.|..|.|||.:.|..|:|||||||:|:|:||||::||||||:.|.|||||::|.|:|
  Rat   853 LRCGGSGRSPALWAAPETLQFGHFSSASDVWSFGIVMWEVMAFGERPYWDMSGQDVIKAVEDGFR 917

  Fly   964 LPAPMDCPEALYQLMLDCWQKQRTHRPTFASIVSTLDNLARQPQ-----SLLTTR-PSPESDGNH 1022
            ||.|.:||..|::|||:||||....||.|:.|.|.|..:.::|:     |....| |:|.:|   
  Rat   918 LPPPRNCPSQLHRLMLECWQKDPGERPRFSQIHSILSKMGQEPEPSKCASTTCLRPPTPLAD--- 979

  Fly  1023 ILDGQRGQNIFI---STDLWLEHIKMSRYCHHFKEANLINAQQISRLTAQQLSDMGITLVGHQKK 1084
                 |..:.|.   |...|||.:.:.||..:|..|...:.:.::.:|||.|..:||:...|::.
  Rat   980 -----RAFSAFPSFGSVGAWLEALDLCRYKDNFSAAGYGSLEAVTEMTAQDLGSLGISSAEHREA 1039

  Fly  1085 ILHQARQLDT 1094
            :|.....|.|
  Rat  1040 LLSGISALQT 1049

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439 69/186 (37%)
FN3 387..476 CDD:238020 24/101 (24%)
FN3 536..623 CDD:238020 19/92 (21%)
EphA2_TM 644..736 CDD:291255 20/91 (22%)
PTKc_EphR 736..1002 CDD:270629 137/319 (43%)
Pkinase_Tyr 741..999 CDD:285015 134/311 (43%)
SAM_1 1033..1092 CDD:278937 17/61 (28%)
SAM 1039..1092 CDD:197735 15/52 (29%)
Epha10XP_038965557.1 EphR_LBD 35..210 CDD:413445 69/187 (37%)
fn3 339..431 CDD:394996 24/101 (24%)
FN3 451..551 CDD:238020 26/122 (21%)
EphA2_TM 568..641 CDD:405290 21/92 (23%)
PKc_like 638..956 CDD:419665 138/320 (43%)
SAM_EPH-A10 982..1051 CDD:188948 19/68 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 121 1.000 Domainoid score I5543
eggNOG 1 0.900 - - E2759_KOG0196
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D397694at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100189
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X82
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.820

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