DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eph and Alk

DIOPT Version :10

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_001162572.1 Gene:Alk / 266802 RGDID:628622 Length:1617 Species:Rattus norvegicus


Alignment Length:387 Identity:129/387 - (33%)
Similarity:197/387 - (50%) Gaps:41/387 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   643 AIVTGVLFLVIFI----IATVYFMRSKHQDDLDKKSTNHLPLPLDYASNEVNSMDTTPIVKKLHL 703
            ::||..|...:.:    |..||  |.|||:      ...:.:.|.....:::.:.|:.|:...:.
  Rat  1042 SVVTSALVAALVLAFSGIMIVY--RRKHQE------LQAMQMELQSPEYKLSKLRTSTIMTDYNP 1098

  Fly   704 NVTTPLFGNSRSYVDPHTYEDPNQAIREFAREIDANYITIEAIIGGGEFGDVCRGRLKIPPNFVQ 768
            |..  ..|.:.|..|              .:|:....||:...:|.|.||:|..|::...||...
  Rat  1099 NYC--FAGKTSSISD--------------LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 1147

  Fly   769 DIDVAIKTLKPGSSEKARCDFLTEASIMGQFDHPNVIYLQGVVTRSNPVMIITEYMENGSLDTFL 833
            .:.||:|||....||:...|||.||.|:.:|:|.|::...||..::.|..|:.|.|..|.|.:||
  Rat  1148 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQALPRFILLELMAGGDLKSFL 1212

  Fly   834 RVNDGK------FQTLQLIVMLRGIASGMSYLSDMNYVHRDLAARNVLV---NAQLICKIADFGL 889
            |....:      ...|.|:.:.|.||.|..||.:.:::|||:||||.|:   .|..|.||.|||:
  Rat  1213 RETRPRPNQPTSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGAGRIAKIGDFGM 1277

  Fly   890 SREIENASDAYTTRGG--KIPVRWTAPEAIAFRKFTSASDVWSYGVVLWEVMSYGERPYWNWSNQ 952
            :|:|..||  |..:||  .:||:|..|||.....|||.:|.||:||:|||:.|.|..||.:.|||
  Rat  1278 ARDIYRAS--YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 1340

  Fly   953 DVIKSIEKGYRLPAPMDCPEALYQLMLDCWQKQRTHRPTFASIVSTLDNLARQPQSLLTTRP 1014
            :|::.:..|.|:..|.:||..:|::|..|||.|...||.||.|:..::...:.|..:.|..|
  Rat  1341 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALP 1402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020
FN3 536..623 CDD:238020
EphA2_TM 640..738 CDD:464211 18/98 (18%)
PTKc_EphR 736..1002 CDD:270629 108/276 (39%)
SAM_1 1029..1092 CDD:425739
AlkNP_001162572.1 MAM 270..428 CDD:99706
MAM 484..639 CDD:459878
FXa_inhibition 991..1025 CDD:464251
PTKc_ALK_LTK 1113..1389 CDD:270632 109/277 (39%)
PRK12323 <1407..>1576 CDD:481241
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.