DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and Ephb2

DIOPT Version :10

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:XP_006538597.1 Gene:Ephb2 / 13844 MGIID:99611 Length:988 Species:Mus musculus


Alignment Length:1057 Identity:445/1057 - (42%)
Similarity:609/1057 - (57%) Gaps:126/1057 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LAHADQVVLLDTTREATLEWTRYPYGPQAQTPGWVEESFTDFVKGINW-RSYVVCDVAYHNVNNW 142
            ||..::.::..||..|.|.|..:|      ..||.|.|..|  :.:|. |:|.||:|...:.|||
Mouse    16 LAAVEETLMDSTTATAELGWMVHP------PSGWEEVSGYD--ENMNTIRTYQVCNVFESSQNNW 72

  Fly   143 LWSPFIDRGSANRLYIEIQFTIRDCSLFPGNALSCKETFSLLFYE--FDAATREPPPWQTDSYRL 205
            |.:.||.|..|:|:::|::|::||||..|....||||||:|.:||  ||.||:..|.|..:.:..
Mouse    73 LRTKFIRRRGAHRIHVEMKFSVRDCSSIPSVPGSCKETFNLYYYEADFDLATKTFPNWMENPWVK 137

  Fly   206 IARIAAGEGRFNQNSDVD-------INTEVKSIA-VNKKGVYFAFRDQGACISVLAVKVYYITCP 262
            :..|||.|. |:|   ||       |||||:|.. |::.|.|.||:|.|.|:|::||:|:|..||
Mouse   138 VDTIAADES-FSQ---VDLGGRVMKINTEVRSFGPVSRNGFYLAFQDYGGCMSLIAVRVFYRKCP 198

  Fly   263 AVTENFAHFNETPTGREITIIEKQNGTCVDNAEPYETPTYL-CKGDGKWTILTGGCRCKAGYEPN 326
            .:.:|.|.|.||.:|.|.|.:....|:|:.|||..:.|..| |.|||:|.:..|.|.||||:|..
Mouse   199 RIIQNGAIFQETLSGAESTSLVAARGSCIANAEEVDVPIKLYCNGDGEWLVPIGRCMCKAGFEAV 263

  Fly   327 YTNKTCTECPLGTFKSPEVTK-CTPCPPNSNASKTGSPFCKCASGFYRHPNDGRHMPCYSPPAAP 390
            .....|..||.||||:.:..: ||.||.||..:..|:..|.|.:|:||...|...|||.:.|:||
Mouse   264 ENGTVCRGCPSGTFKANQGDEACTHCPINSRTTSEGATNCVCRNGYYRADLDPLDMPCTTIPSAP 328

  Fly   391 TNLTLLFVDQTSAIISWSAPAKNESFSSETNSKIYHSDIVYKI----------KCNICSPNVVYN 445
             ...:..|::||.::.|:.|  .:|...|        |:||.|          .|..|..||.|.
Mouse   329 -QAVISSVNETSLMLEWTPP--RDSGGRE--------DLVYNIICKSCGSGRGACTRCGDNVQYA 382

  Fly   446 PSTDTFNETKITLTNLEPVTTYTVQIHAINSVSHINEFKRHSNESSLVAVSDIVFSNTSLLNIPL 510
            |......|.:|.:::|...|.||.:|.|:|.|:..:.|....                       
Mouse   383 PRQLGLTEPRIYISDLLAHTQYTFEIQAVNGVTDQSPFSPQF----------------------- 424

  Fly   511 DLNEVKTGQAEIVFTTESVLLSTVFNLRILAITNKDADLEWDKPVQSDFPLEFYEVRWFPKVELD 575
                     |.:..||.....|.|..:..::.|.....|.|.:|.|.:..:..||::::.|.||.
Mouse   425 ---------ASVNITTNQAAPSAVSIMHQVSRTVDSITLSWSQPDQPNGVILDYELQYYEKQELS 480

  Fly   576 AINKSALNTKETKAHIVGLLENTEYGFQVRCKTNNGFGSYSNMIYAQTLQSVGSVYDDSV--QIR 638
            ..|.:|:.:......:.||.....|.||||.:|..|:|.||..:|.||:..  :.|..|:  ::.
Mouse   481 EYNATAIKSPTNTVTVQGLKAGAIYVFQVRARTVAGYGRYSGKMYFQTMTE--AEYQTSIKEKLP 543

  Fly   639 FIAGAIVTGVLFLVIFIIATVYFMRSKHQDDLDKKSTNHLPLPLDYASNEVNSMDTTPIVKKLHL 703
            .|.|:...|::||:..::..:...|.:..:..|.:.|:.|.   .|.|..:     ||.:|    
Mouse   544 LIVGSSAAGLVFLIAVVVIAIVCNRRRGFERADSEYTDKLQ---HYTSGHM-----TPGMK---- 596

  Fly   704 NVTTPLFGNSRSYVDPHTYEDPNQAIREFAREIDANYITIEAIIGGGEFGDVCRGRLKIPPNFVQ 768
                       .|:||.||||||:|:||||:|||.:.:.||.:||.||||:||.|.||:|..  :
Mouse   597 -----------IYIDPFTYEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGK--R 648

  Fly   769 DIDVAIKTLKPGSSEKARCDFLTEASIMGQFDHPNVIYLQGVVTRSNPVMIITEYMENGSLDTFL 833
            :|.|||||||.|.:||.|.|||:||||||||||||||:|:||||:|.|||||||:|||||||:||
Mouse   649 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL 713

  Fly   834 RVNDGKFQTLQLIVMLRGIASGMSYLSDMNYVHRDLAARNVLVNAQLICKIADFGLSREIE-NAS 897
            |.|||:|..:||:.||||||:||.||:|||||||||||||:|||:.|:||::||||||.:| :.|
Mouse   714 RQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 778

  Fly   898 D-AYTTR-GGKIPVRWTAPEAIAFRKFTSASDVWSYGVVLWEVMSYGERPYWNWSNQDVIKSIEK 960
            | .||:. |||||:||||||||.:|||||||||||||:|:||||||||||||:.:|||||.:||:
Mouse   779 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ 843

  Fly   961 GYRLPAPMDCPEALYQLMLDCWQKQRTHRPTFASIVSTLDNLARQPQSLLTTRPSPESDGNHILD 1025
            .||||.|||||.||:|||||||||.|.|||.|..||:|||.:.|.|.||....|........:||
Mouse   844 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLSSGINLPLLD 908

  Fly  1026 GQRGQNI-----FISTDLWLEHIKMSRYCHHFKEANLINAQQISRLTAQQLSDMGITLVGHQKKI 1085
                :.|     |.:.|.|||.|||.:|...|..|...:...:|::..:.:..:|:||.||||||
Mouse   909 ----RTIPDYTSFNTVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRVGVTLAGHQKKI 969

  Fly  1086 LH-------QARQLDTI 1095
            |:       |..|:.::
Mouse   970 LNSIQVMRAQMNQIQSV 986

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439 75/185 (41%)
FN3 387..476 CDD:238020 28/98 (29%)
FN3 536..623 CDD:238020 25/86 (29%)
EphA2_TM 640..738 CDD:464211 30/97 (31%)
PTKc_EphR 736..1002 CDD:270629 190/268 (71%)
SAM_1 1029..1092 CDD:425739 24/74 (32%)
Ephb2XP_006538597.1 EphR_LBD_B2 19..196 CDD:198445 75/188 (40%)
fn3 326..421 CDD:394996 29/105 (28%)
fn3 437..521 CDD:394996 24/83 (29%)
EphA2_TM 545..619 CDD:464211 29/96 (30%)
PTKc_EphR_B 618..886 CDD:173638 190/269 (71%)
SAM_EPH-B2 912..982 CDD:188951 23/69 (33%)

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