DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and LOC116410852

DIOPT Version :10

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:XP_031757922.1 Gene:LOC116410852 / 116410852 XenbaseID:XB-GENE-29096463 Length:728 Species:Xenopus tropicalis


Alignment Length:779 Identity:329/779 - (42%)
Similarity:451/779 - (57%) Gaps:94/779 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 CTPCPPNSNASKTGSPFCKCASGFYRHPNDGRHMPCYSPPAAPTNLTLLFVDQTSAIISWSAPAK 412
            |..||.||..:..|:..|.|.:|:||..:|...|||.:.|:||.|: :..|::||.::.|:.|  
 Frog    11 CLHCPINSRTTSEGATNCVCRTGYYRSDSDPMQMPCTTIPSAPQNV-ISSVNETSLMLEWAPP-- 72

  Fly   413 NESFSSETNSKIYHSDIVYKI----------KCNICSPNVVYNPSTDTFNETKITLTNLEPVTTY 467
            .:|...|        |:||.|          .|..|..||.:.|......|.::.:::|...|.|
 Frog    73 RDSGGRE--------DLVYNIICKSCGSGRGACTRCGDNVQFAPRQLGLTEPRVYISDLLAHTQY 129

  Fly   468 TVQIHAINSVSHINEFKRHSNESSLVAVSDIVFSNTSLLNIPLDLNEVKTGQAEIVFTTESVLLS 532
            |.::.|:|.|:..:.:..|.                                |.:..||.....|
 Frog   130 TFEVQAVNGVTDQSPYSPHF--------------------------------ASVNITTNQAAPS 162

  Fly   533 TVFNLRILAITNKDADLEWDKPVQSDFPLEFYEVRWFPKVELDAINKSALNTKETKAHIVGLLEN 597
            :|..:.:::.|.....|.|.:|.|.:..:..||:.::.| ||...|.|.:.:......:.||...
 Frog   163 SVSIMHLVSRTVDSITLSWSQPDQPNGVILDYELLYYEK-ELTEHNSSVVKSSTNTVLVPGLKAG 226

  Fly   598 TEYGFQVRCKTNNGFGSYSNMIYAQTLQSVGSVYDDSVQ--IRFIAGAIVTGVLFLVIFIIATVY 660
            |.|.||||.:|..|:|.||..:|.||:..  :.|..|.|  :..|.|:...|::||:..::..:.
 Frog   227 TIYVFQVRARTVAGYGRYSGKMYFQTMTE--AEYQSSFQEKLPLIIGSSAAGLVFLIALVVIIIV 289

  Fly   661 FMR--------SKHQDDLDKKSTNHLPLPLDYASNEVNSMDTTPIVKKLHLNVTTPLFGNSRSYV 717
            ..|        |::.|.|...::.|....|........|:..||.:|               .|:
 Frog   290 CNRRRGFERADSEYTDKLQHYTSGHSTYRLPSPGLGARSLVVTPGMK---------------IYI 339

  Fly   718 DPHTYEDPNQAIREFAREIDANYITIEAIIGGGEFGDVCRGRLKIPPNFVQDIDVAIKTLKPGSS 782
            ||.||||||:|:||||:|||.:.:.||.:||.||||:||.|.||:|..  ::|.|||||||.|.:
 Frog   340 DPFTYEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGK--REIFVAIKTLKSGYT 402

  Fly   783 EKARCDFLTEASIMGQFDHPNVIYLQGVVTRSNPVMIITEYMENGSLDTFLRVNDGKFQTLQLIV 847
            ||.|.|||:||||||||||||||:|:||||:|:|||||||:|||||||:|||.|||:|..:||:.
 Frog   403 EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG 467

  Fly   848 MLRGIASGMSYLSDMNYVHRDLAARNVLVNAQLICKIADFGLSREIE-NASD-AYTTR-GGKIPV 909
            ||||||:||.||:|||||||||||||:|||:.|:||::||||||.:| :.|| .||:. |||||:
 Frog   468 MLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 532

  Fly   910 RWTAPEAIAFRKFTSASDVWSYGVVLWEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEAL 974
            ||||||||.:|||||||||||||:|:||||||||||||:.:|||||.:||:.||||.|||||.||
 Frog   533 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPNAL 597

  Fly   975 YQLMLDCWQKQRTHRPTFASIVSTLDNLARQPQSLLTTRPSPESDGNHILDGQ-RGQNIFISTDL 1038
            :|||||||||.|.|||.|..||:|||.:.|.|.:|....|........:||.. .....|.:.|.
 Frog   598 HQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNTLKAVAPLSSGVTLPLLDRTVPDYTSFSTVDE 662

  Fly  1039 WLEHIKMSRYCHHFKEANLINAQQISRLTAQQLSDMGITLVGHQKKILH-------QARQLDTI 1095
            ||:.|||.:|...|..|.......:|:::.:.:..:|:||.|||||||:       |..|:.::
 Frog   663 WLDAIKMGQYKESFASAGFSAFDVVSQMSMEDILRVGVTLAGHQKKILNSIQVMRAQMNQIQSV 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020 26/98 (27%)
FN3 536..623 CDD:238020 26/86 (30%)
EphA2_TM 640..738 CDD:464211 31/105 (30%)
PTKc_EphR 736..1002 CDD:270629 190/268 (71%)
SAM_1 1029..1092 CDD:425739 22/69 (32%)
LOC116410852XP_031757922.1 fn3 51..146 CDD:394996 27/105 (26%)
fn3 162..245 CDD:394996 25/83 (30%)
EphA2_TM 269..359 CDD:464211 30/104 (29%)
PTKc_EphR_B 358..626 CDD:173638 190/269 (71%)
SAM_EPH-B2 652..722 CDD:188951 22/69 (32%)
Blue background indicates that the domain is not in the aligned region.

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