DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eph and LOC108645842

DIOPT Version :9

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:XP_031752075.1 Gene:LOC108645842 / 108645842 -ID:- Length:558 Species:Xenopus tropicalis


Alignment Length:567 Identity:235/567 - (41%)
Similarity:327/567 - (57%) Gaps:48/567 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   531 LSTVFNLRILAITNKDADLEWDKPVQSDFPL---EFYEVRWFPKVELDAINKSALNTKETKAHIV 592
            ||.:.::|...|..|...|.|..|.   ||.   ..||::::.|.:.|. :.|.:.|..|...:.
 Frog     9 LSLITDIRADKIDQKRITLSWQDPA---FPFINNTEYEIKYYEKDQRDQ-SYSTVRTPLTTVTVY 69

  Fly   593 GLLENTEYGFQVRCKTNNGFGSYSNMIYAQTLQSVGSVYDDSVQIRFIAGAIVTGVLFLVIFIIA 657
            .|...|.|.||:|..::..|.|||..|..:||..:..|..:...:..|....|.|.:.|:..::.
 Frog    70 NLKPGTVYVFQIRTSSSQDFSSYSPTIEVETLGELALVSTEQNPLIIIVIVSVAGFIVLLSMVVG 134

  Fly   658 TVYFMR----SKHQDDLDKKSTNHLPLPLDYASNEVNSMDTTPIVKKLHLNVTTPLFGNSRSYVD 718
            .:.:.|    ||...|.|::...|..:|                              ..|:|:|
 Frog   135 LMIWRRQCGYSKASQDGDEELYFHFKIP------------------------------TRRTYID 169

  Fly   719 PHTYEDPNQAIREFAREIDANYITIEAIIGGGEFGDVCRGRLKIPPNFVQDIDVAIKTLKPGSSE 783
            |.|.|||.||:..||:|:|.:.|.||.|:|.|::|:||:|.||:|..  :::.|||:||:.|.||
 Frog   170 PDTCEDPMQAVHLFAKELDNSCIKIERILGTGDYGEVCKGCLKLPSK--RELPVAIQTLRAGCSE 232

  Fly   784 KARCDFLTEASIMGQFDHPNVIYLQGVVTRSNPVMIITEYMENGSLDTFLRVNDGKFQTLQLIVM 848
            |.:..||.||||||||||||:|.|:||:||.|.:|.:.||:.||.||:|:|.|||:....|||.|
 Frog   233 KQKRAFLAEASIMGQFDHPNIIRLEGVITRGNTMMTVMEYLGNGVLDSFVRKNDGQLTVPQLIGM 297

  Fly   849 LRGIASGMSYLSDMNYVHRDLAARNVLVNAQLICKIADFGLSREIENASDAYTTRGGKIPVRWTA 913
            |.||||||.||::|:|:|:.|||..:|||:.|:|||:.|...:| :.....::|.|||..|.|||
 Frog   298 LTGIASGMKYLTEMSYIHKCLAANKILVNSNLVCKISGFRQMQE-DKLDTIFSTMGGKSTVLWTA 361

  Fly   914 PEAIAFRKFTSASDVWSYGVVLWEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEALYQLM 978
            ||||.:.::::||||||:|:|:||||||||||||:.|||||||:||.|:|||||:.||..|:|||
 Frog   362 PEAIQYHRYSTASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAIEDGFRLPAPISCPPYLHQLM 426

  Fly   979 LDCWQKQRTHRPTFASIVSTLDNLARQP-QSLLTTRPSPESDGNHILDGQRGQNIFISTDL---W 1039
            ||||||.|..||.|..|.|.|....:.| :|..||.....|....|...:|....|.|.:.   |
 Frog   427 LDCWQKDRNERPKFTHIHSILSKHGQSPDKSKSTTSTINRSHSTSIPLIERTFTTFPSFNSVGEW 491

  Fly  1040 LEHIKMSRYCHHFKEANLINAQQISRLTAQQLSDMGITLVGHQKKIL 1086
            ||.|:|.||..:|..|.....:.::|:|.|.:..:|||.|.|||.||
 Frog   492 LEAIEMERYKDNFTAAGYCYLESVARMTVQDVMSLGITSVEHQKTIL 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020
FN3 536..623 CDD:238020 26/89 (29%)
EphA2_TM 644..736 CDD:291255 22/95 (23%)
PTKc_EphR 736..1002 CDD:270629 150/265 (57%)
Pkinase_Tyr 741..999 CDD:285015 148/257 (58%)
SAM_1 1033..1092 CDD:278937 23/57 (40%)
SAM 1039..1092 CDD:197735 21/48 (44%)
LOC108645842XP_031752075.1 FN3 13..100 CDD:238020 26/90 (29%)
EphA2_TM 117..188 CDD:405290 24/100 (24%)
PKc_like 186..449 CDD:419665 151/265 (57%)
SAM_EPH-A10 479..548 CDD:188948 23/60 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D397694at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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