DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eph and ephb3

DIOPT Version :10

Sequence 1:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster
Sequence 2:XP_002935194.1 Gene:ephb3 / 100489199 XenbaseID:XB-GENE-488644 Length:974 Species:Xenopus tropicalis


Alignment Length:27 Identity:9/27 - (33%)
Similarity:14/27 - (51%) Gaps:6/27 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EAAVAKKKVKEGESLVIDSMN-RLHRI 44
            |...::|..:|     ||.|| :|.|:
 Frog   552 ETITSEKYAQE-----IDEMNQKLQRL 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020
FN3 536..623 CDD:238020
EphA2_TM 640..738 CDD:464211
PTKc_EphR 736..1002 CDD:270629
SAM_1 1029..1092 CDD:425739
ephb3XP_002935194.1 EphR_LBD 18..190 CDD:470656
FN3 319..423 CDD:238020
FN3 428..518 CDD:238020
EphA2_TM 535..605 CDD:464211 9/27 (33%)
PTKc_EphR_B 604..872 CDD:173638
SAM_EPH-B3 898..966 CDD:188952
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.