Protein Alignment CG1909 and Rapsn

DIOPT Version :10

• Sequence 1: NP_651928.1
• Gene: CG1909 / 43800
• FlyBaseID: FBgn0039911
• Length: 606
• Species: Drosophila melanogaster
• Sequence 2: NP_033049.2
• Gene: Rapsn / 19400
• MGIID: 99422
• Length: 412
• Species: Mus musculus
• Alignment Length: 413
• Identity: 124/413 - (30%)
• Similarity: 215/413 - (52%)
• Gaps: 19/413 - (4%)

  Fly    95 KRKIERGRRLYEQNNQTEAVRTWRSALKGTCQREDCFQLLGYLYQAHMDWGKFREAIEFSHQQLG 159
            |::||:|.:||:.|...:|::.|...|:........|::||.|..||.:.|:::|.::|:..|:.
Mouse     7 KQQIEKGLQLYQSNQTEKALQVWMKVLEKGSDLVGRFRVLGCLVTAHSEMGRYKEMLKFAVVQID 71

  Fly   160 ISEELDSPNMRAETYLNLSRAHASLGGLERSLSYARHSLYNECGTKCRS---GLVHLTVARVYLE 221
            .:..|:..:...|:||||:|::..|....:::||.:..| ...||:..:   |.|.|::...:|.
Mouse    72 TARGLEDADFLLESYLNLARSNEKLCEFHKTISYCKTCL-GLPGTRAGAQLGGQVSLSMGNAFLG 135

  Fly   222 MGGFSRALEGLQGAYKIATAIGDPSLELQVYVALSELFGRLQDNDKSATYASKAYDLSRSLQLGD 286
            :..|.:|||..:.|.:.|....|..||.:|..:|...:.:::|.:|:..:..||.:|......|
Mouse   136 LSLFQKALESFEKALRYAHNNDDTMLECRVCCSLGSFYAQVKDYEKALFFPCKAAELVNDYGKG- 199

  Fly   287 LNSCHHRA-ALLRMAVSLRKQGELGDAQDYCKEATKLSLISGDQATYTRSIRVMGDIYRNKMDMD 350
             .|..:|| :...|||:.|..|.||.|.:.|:|:.|::|..||:......:....||:|::.|::
Mouse   200 -WSLKYRAMSQYHMAVAYRLLGHLGSAMECCEESMKIALQHGDRPLQALCLLCFADIHRSRGDLE 263

  Fly   351 RAFRQYEQAMGTSASLGDRMAQMEAMDGAARCLETLRLQNKICNCRPLEFNTRLLEVASSIGAKF 415
            .||.:|:.||.....:|:|:.|:..:.|.|:|....::|:|     .|:...:..::|..:|.|.
Mouse   264 TAFPRYDSAMSIMTEIGNRLGQVHVLLGVAKCWMARKVQDK-----ALDAIEKAQDLAEEVGNKL 323

  Fly   416 LVRKIRCRLALIYRALGDEDQYNTHFRLANQTDAALGLNCGACGELLGLRPENLEALPCAHILHA 480
            ...|:.|....|||:.|.:.:..||....::......|.||.|||.:|.|...|:||||:||.|.
Mouse   324 SQLKLHCLSESIYRSKGLQRELRTHVVRFHECVEETELYCGLCGESIGERNSRLQALPCSHIFHL 388

  Fly   481 RCAYEILRRREKNAPRSCPACNK 503
            ||.       :.|..||||.|.:
Mouse   389 RCL-------QNNGTRSCPNCRR 404

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1909	NP_651928.1	Rapsyn_N	89..168	CDD:431369	21/72 (29%)
		LapB	92..386	CDD:442196	86/294 (29%)
		TPR repeat	94..122	CDD:276809	9/26 (35%)
		TPR repeat	127..164	CDD:276809	10/36 (28%)
		TPR repeat	171..198	CDD:276809	9/26 (35%)
		TPR repeat	211..237	CDD:276809	8/25 (32%)
		TPR repeat	248..278	CDD:276809	7/29 (24%)
		TPR repeat	293..321	CDD:276809	12/28 (43%)
		TPR repeat	333..360	CDD:276809	7/26 (27%)
		RING-H2_Rapsyn	452..503	CDD:438141	24/50 (48%)
Rapsn	NP_033049.2	SNAP	1..80	CDD:451671	21/72 (29%)
		TPR 1	6..39		10/31 (32%)
		LapB	9..329	CDD:442196	92/327 (28%)
		TPR 2	83..116		11/33 (33%)
		TPR 3	123..156		10/32 (31%)
		TPR repeat	127..151	CDD:276809	7/23 (30%)
		TPR repeat	156..192	CDD:276809	9/35 (26%)
		TPR 4	163..196		7/32 (22%)
		TPR repeat	197..234	CDD:276809	14/38 (37%)
		TPR 5	206..239		13/32 (41%)
		TPR 6	246..279		9/32 (28%)
		TPR repeat	246..274	CDD:276809	8/27 (30%)
		TPR 7	286..319		7/37 (19%)
		RING-H2_Rapsyn	360..404	CDD:438141	24/50 (48%)