DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mkp and ynbD

DIOPT Version :10

Sequence 1:NP_001036572.1 Gene:Mkp / 4379907 FlyBaseID:FBgn0083992 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_415929.1 Gene:ynbD / 945985 ECOCYCID:G6730 Length:430 Species:Escherichia coli


Alignment Length:82 Identity:28/82 - (34%)
Similarity:40/82 - (48%) Gaps:17/82 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LPCLDL--PETNLMNYILPASMEFIEDAHRSQGCVLVHCNAGVSRSPSVVIGYLMQRRDMCY--- 175
            :|.|||  ||..    .|..::..:|.....||.|||||..|:|||..||..:|     :||   
E. coli   342 VPMLDLVVPEEG----ELRQAVAMLETLREEQGSVLVHCALGLSRSALVVAAWL-----LCYGHC 397

  Fly   176 ---EDAYNLVKSWRPCI 189
               .:|.:.:::.||.|
E. coli   398 KTVNEAISYIRARRPQI 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MkpNP_001036572.1 DSP 66..201 CDD:350348 28/82 (34%)
ynbDNP_415929.1 PAP2_Aur1_like 47..197 CDD:239481
DSP_bac 295..429 CDD:350376 28/82 (34%)
Blue background indicates that the domain is not in the aligned region.

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