DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mkp and Dusp12

DIOPT Version :10

Sequence 1:NP_001036572.1 Gene:Mkp / 4379907 FlyBaseID:FBgn0083992 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_071584.1 Gene:Dusp12 / 64014 RGDID:68375 Length:339 Species:Rattus norvegicus


Alignment Length:161 Identity:55/161 - (34%)
Similarity:83/161 - (51%) Gaps:38/161 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GFVVDTKPDSVPACILSDFLYLGSQDAVSA-DNIIKYKITHILSV-------------GIQTPEV 105
            |..|:.:|.          ||||...||:. |.:.:..||.:|:|             |:|:   
  Rat    25 GHAVEVRPG----------LYLGGAAAVAGPDYLREAGITAVLTVDSEPAFPAGAGFEGLQS--- 76

  Fly   106 EWPLPVNCTFLPCLDLPETNLMNYILPASMEFIEDAHRSQG-CVLVHCNAGVSRSPSVVIGYLMQ 169
                    .|:|.||.|||:|::: |...:.||..| ||:| .|||||:||||||.:||..::|:
  Rat    77 --------LFVPALDKPETDLLSH-LDRCVAFIGQA-RSEGRAVLVHCHAGVSRSVAVVTAFIMK 131

  Fly   170 RRDMCYEDAYNLVKSWRPCIQPNAGFIQQLK 200
            ...:.:|.||..:::.:|..:.|.||..|||
  Rat   132 TEQLTFEKAYENLQTIKPEAKMNEGFEWQLK 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MkpNP_001036572.1 DSP 66..201 CDD:350348 52/150 (35%)
Dusp12NP_071584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 55/161 (34%)
DSP_DUSP12 28..172 CDD:350370 54/158 (34%)

Return to query results.
Submit another query.