DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mkp and ssh

DIOPT Version :10

Sequence 1:NP_001036572.1 Gene:Mkp / 4379907 FlyBaseID:FBgn0083992 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster


Alignment Length:168 Identity:54/168 - (32%)
Similarity:78/168 - (46%) Gaps:28/168 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LDPREYGFVVDTK------PDSVPACILSDFLYLGSQ-DAVSADNIIKYKITHILSVGIQTPEVE 106
            :|..||...:|.:      ....|..|. :.:||||: :|.:.:.:.|..:.|||:|   |.|::
  Fly   362 MDLGEYKSFIDAEMLVILGQMDAPTKIF-EHVYLGSEWNASNLEELQKNGVRHILNV---TREID 422

  Fly   107 WPLPVNCTFLP---------CLDLPETNLMNYILPASMEFIEDAHRSQGCVLVHCNAGVSRSPSV 162
                   .|.|         ..|..:|||:.| ...:..:|..|......|||||..|||||.||
  Fly   423 -------NFFPGTFEYFNVRVYDDEKTNLLKY-WDDTFRYITRAKAEGSKVLVHCKMGVSRSASV 479

  Fly   163 VIGYLMQRRDMCYEDAYNLVKSWRPCIQPNAGFIQQLK 200
            ||.|.|:.....::.|...||..|.||:||..|:.||:
  Fly   480 VIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQLE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MkpNP_001036572.1 DSP 66..201 CDD:350348 50/145 (34%)
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592 4/16 (25%)
DSP_slingshot 385..523 CDD:350363 50/145 (34%)
Blue background indicates that the domain is not in the aligned region.

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