DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mkp and Ssh1

DIOPT Version :10

Sequence 1:NP_001036572.1 Gene:Mkp / 4379907 FlyBaseID:FBgn0083992 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_001414408.1 Gene:Ssh1 / 304580 RGDID:1306038 Length:1040 Species:Rattus norvegicus


Alignment Length:141 Identity:50/141 - (35%)
Similarity:72/141 - (51%) Gaps:21/141 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 ILSDFLYLGSQ-DAVSADNIIKYKITHILSVGIQTPEVEWPLPVNCTFLPCL---------DLPE 123
            ::.|.|||||: :|.:.:.:....:.:||:|   |.|::       .|.|.|         |...
  Rat   311 LIFDHLYLGSEWNASNLEELQGSGVDYILNV---TREID-------NFFPGLFAYHNIRVYDEET 365

  Fly   124 TNLMNYILPASMEFIEDAHRSQGCVLVHCNAGVSRSPSVVIGYLMQRRDMCYEDAYNLVKSWRPC 188
            |:|:.:...| .:||..|.|:....||||..|||||.|.||.|.|:......|.|:|.||..|..
  Rat   366 TDLLAHWNEA-YQFINKAKRNHSKCLVHCKMGVSRSASTVIAYAMKEFGWPLEKAFNYVKQKRSI 429

  Fly   189 IQPNAGFIQQL 199
            .:|||||::||
  Rat   430 TRPNAGFMRQL 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MkpNP_001036572.1 DSP 66..201 CDD:350348 50/141 (35%)
Ssh1NP_001414408.1 None

Return to query results.
Submit another query.