DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mkp and Ssh2

DIOPT Version :10

Sequence 1:NP_001036572.1 Gene:Mkp / 4379907 FlyBaseID:FBgn0083992 Length:203 Species:Drosophila melanogaster
Sequence 2:XP_038941949.1 Gene:Ssh2 / 303342 RGDID:1309389 Length:1450 Species:Rattus norvegicus


Alignment Length:139 Identity:42/139 - (30%)
Similarity:67/139 - (48%) Gaps:21/139 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 DFLYLGSQ-DAVSADNIIKYKITHILSVGIQTPEVEWPLPVNCTFLP---------CLDLPETNL 126
            :.::|||: :|.:.:::....:.:||:|   |.|::       .|.|         ..|...|:|
  Rat   340 EHVFLGSEWNASNLEDLQNRGVRYILNV---TREID-------NFFPGVFEYHNIRVYDEEATDL 394

  Fly   127 MNYILPASMEFIEDAHRSQGCVLVHCNAGVSRSPSVVIGYLMQRRDMCYEDAYNLVKSWRPCIQP 191
            :.| ...:.:||..|.:.....||||..|||||.|.||.|.|:......:.||..||..|...:|
  Rat   395 LAY-WNDTYKFISKAKKHGSKCLVHCKMGVSRSASTVIAYAMKEYGWNLDRAYEYVKERRTVTKP 458

  Fly   192 NAGFIQQLK 200
            |..|::||:
  Rat   459 NPSFMRQLE 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MkpNP_001036572.1 DSP 66..201 CDD:350348 42/139 (30%)
Ssh2XP_038941949.1 SSH-N 38..263 CDD:212166
DEK_C 277..329 CDD:462592
DSP_slingshot_2 332..475 CDD:350417 42/139 (30%)
Blue background indicates that the domain is not in the aligned region.

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