DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ephrin and efnb3a

DIOPT Version :10

Sequence 1:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_692670.2 Gene:efnb3a / 564234 ZFINID:ZDB-GENE-100316-1 Length:337 Species:Danio rerio


Alignment Length:271 Identity:72/271 - (26%)
Similarity:109/271 - (40%) Gaps:66/271 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 MHWNTSNSIFRIDNTDHIIDVNKGNLAFEFDQVHIICPVYEPG--TFENETEKYIIYNVS-KVEY 280
            ::|||.|..|. |...:|:....|      |::.::||...|.  ....|.|.|.:|.|| :.:.
Zfish    42 VYWNTLNRRFG-DERGYILYPQIG------DRLDLVCPATSPAGPNSPPEYEFYKLYLVSTREQA 99

  Fly   281 ETCRITNADPRVIAICDKPQKLMFFTITFRPFTPQPGGLEFLPGNDYYFISTS--SKDDLYRRIG 343
            :.|.:..| |.::..||||...|.|||.|:.::|...|.||....|||.|:||  :|:.:....|
Zfish   100 DRCEVMGA-PNLLLTCDKPNSDMRFTIKFQEYSPNLWGHEFKNLRDYYIIATSDGTKEGIDSMRG 163

  Fly   344 GRCSTNNMKVVFKV-------------------CCAPE--------DNNKTTALSNSKSVTDTGG 381
            |.|.|..||:|.||                   ...|:        :.:::.|:|.|.....:||
Zfish   164 GVCVTRGMKLVLKVGQTAYGLPPKPKPDPGRPNSKIPDTESGSKGGETSESGAVSASNIALISGG 228

  Fly   382 A-------INVNIA-----NNDESHVNSHGNNIAIGT---NIGINGGQIIGGPQSAGIPINPLSG 431
            |       |.:.||     .....|..:|...:.:.:   ..|.:||...|.           ||
Zfish   229 AGGAFILLIAIVIAVVCYRRRKAKHSETHHPALTLSSLTPKRGSSGGTATGS-----------SG 282

  Fly   432 NNNINGIPTTI 442
            .||....|:.|
Zfish   283 GNNNGSEPSDI 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 50/162 (31%)
efnb3aXP_692670.2 Cupredoxin 38..178 CDD:473140 49/143 (34%)

Return to query results.
Submit another query.