Protein Alignment Ephrin and Efna4

DIOPT Version :10

• Sequence 1: NP_651927.1
• Gene: Ephrin / 43799
• FlyBaseID: FBgn0040324
• Length: 652
• Species: Drosophila melanogaster
• Sequence 2: NP_001101162.1
• Gene: Efna4 / 310643
• RGDID: 1307808
• Length: 204
• Species: Rattus norvegicus
• Alignment Length: 200
• Identity: 54/200 - (27%)
• Similarity: 85/200 - (42%)
• Gaps: 42/200 - (21%)

  Fly   196 LLTLICMETVLLSTMSSCAKTFY-MHWNTSNSIFRIDNTDHIIDVNKGNLAFEFDQVHIICPVYE 259
            ||..:....:|.|.:..|:...: ::||::|.  |:...|.::::...      |.:.|.||.||
  Rat     6 LLRTVLWAALLGSRLRGCSSLRHSIYWNSTNP--RLLRGDAVVELGLN------DYLDIFCPHYE 62

  Fly   260 -PGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICDKPQKLMFFTITFRP------------ 311
             ||..|. .|.:.:|.|....||.|:...|:......|         |:.|.|
  Rat    63 SPGPPEG-PETFALYIVDWSGYEACKAEGANAFQRWNC---------TLPFAPFVPVRFSEKIQR 117

  Fly   312 FTPQPGGLEFLPGNDYYFISTSSKDDLYRRIGGRCSTNNMKVVFKVCCAPEDNNKTTALSNSKSV 376
            |||.|.|.|||||..||:||..:.:.     .|:|    :::...||| .||.:::.....|...
  Rat   118 FTPFPLGFEFLPGETYYYISVPTPES-----PGQC----LRLQVSVCC-KEDRSESAHPVGSPGE 172

  Fly   377 TDTGG 381
            :.|.|
  Rat   173 SGTSG 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ephrin	NP_651927.1	Ephrin_ectodomain	217..358	CDD:259861	41/154 (27%)
Efna4	NP_001101162.1	Ephrin-A_Ectodomain	27..155	CDD:259896	41/154 (27%)