DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ephrin and EFNB1

DIOPT Version :10

Sequence 1:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_004420.1 Gene:EFNB1 / 1947 HGNCID:3226 Length:346 Species:Homo sapiens


Alignment Length:192 Identity:60/192 - (31%)
Similarity:89/192 - (46%) Gaps:34/192 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 DQVHIICPVYEPGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICDKPQKLMFFTITFRPFT 313
            |::.||||..|.|   ...|.|.:|.|...:...|. |..||.|:..|::|::.:.|||.|:.|:
Human    58 DKLDIICPRAEAG---RPYEYYKLYLVRPEQAAACS-TVLDPNVLVTCNRPEQEIRFTIKFQEFS 118

  Fly   314 PQPGGLEFLPGNDYYFISTS--SKDDLYRRIGGRCSTNNMKVVFKVCCAPEDNNKTT--ALSNSK 374
            |...||||...:|||..|||  |.:.|..|.||.|.|..||::.||   .:|.|..|  .|:.|:
Human   119 PNYMGLEFKKHHDYYITSTSNGSLEGLENREGGVCRTRTMKIIMKV---GQDPNAVTPEQLTTSR 180

  Fly   375 SVTDTGGAINV---------NIANNDESH--VNSHGNNIAIGTNIGINGGQIIGGPQSAGIP 425
            ...:....:.:         ::.::|..|  ||....     :..|.:||       |:|.|
Human   181 PSKEADNTVKMATQAPGSRGSLGDSDGKHETVNQEEK-----SGPGASGG-------SSGDP 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 44/110 (40%)
EFNB1NP_004420.1 Ephrin-B_Ectodomain 31..165 CDD:259897 45/113 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..228 12/70 (17%)
Nuclear localization signal. /evidence=ECO:0000269|PubMed:16930449 260..273
Interaction with ZHX2. /evidence=ECO:0000250|UniProtKB:P52795 263..294
PDZ-binding. /evidence=ECO:0000255 344..346
Blue background indicates that the domain is not in the aligned region.

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