DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ephrin and EFNA3

DIOPT Version :10

Sequence 1:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_004943.1 Gene:EFNA3 / 1944 HGNCID:3223 Length:238 Species:Homo sapiens


Alignment Length:221 Identity:56/221 - (25%)
Similarity:92/221 - (41%) Gaps:52/221 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 LLTLICMETVLLSTMS-----SCAKTFYMHWNTSNSIFRIDNTDHIIDVNKGNLAFEFDQVHIIC 255
            ||.|:.:...||..::     :......::||:||...|.:.....::||        |.:.|.|
Human     7 LLLLLLVPVPLLPLLAQGPGGALGNRHAVYWNSSNQHLRREGYTVQVNVN--------DYLDIYC 63

  Fly   256 PVYE-----------PGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICDK---PQKLMFFT 306
            |.|.           ||   ...|:|::|.||:..|.||..:....|  ..|::   |...:.|:
Human    64 PHYNSSGVGPGAGPGPG---GGAEQYVLYMVSRNGYRTCNASQGFKR--WECNRPHAPHSPIKFS 123

  Fly   307 ITFRPFTPQPGGLEFLPGNDYYFISTSSKDDLYRRIGGRCSTNNMKVVFKVCCAPEDNNKTTALS 371
            ..|:.::....|.||..|::||:|||.:     ..:..:|.  .|||.  ||||      :|:.|
Human   124 EKFQRYSAFSLGYEFHAGHEYYYISTPT-----HNLHWKCL--RMKVF--VCCA------STSHS 173

  Fly   372 NSKSVT-----DTGGAINVNIANNDE 392
            ..|.|.     ..|..:.:|:..:.|
Human   174 GEKPVPTLPQFTMGPNVKINVLEDFE 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 40/154 (26%)
EFNA3NP_004943.1 Ephrin-A_Ectodomain 31..166 CDD:259896 40/156 (26%)

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