DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ephrin and efn-4

DIOPT Version :10

Sequence 1:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_499947.1 Gene:efn-4 / 176882 WormBaseID:WBGene00001165 Length:348 Species:Caenorhabditis elegans


Alignment Length:426 Identity:89/426 - (20%)
Similarity:149/426 - (34%) Gaps:107/426 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 MIPFPKFGATSFVTLLTLICMETVLLSTMSSCAKTFYMHWNTSNSIFRIDNTDHIIDVNKGNLAF 246
            |..|.:|..|:|: ||.|            :.|....::||::||:||  |....|:|..|    
 Worm     1 MKQFFEFLITTFL-LLGL------------AAADEHIVYWNSTNSLFR--NRQPTIEVRMG---- 46

  Fly   247 EFDQVHIICPVYEPGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICD-------------- 297
              |.|..:||..|.|  .|:.|..|:|.|::...:.|.:.:....||....              
 Worm    47 --DVVRFVCPDNEEG--RNDGEYLIVYEVTEFAMDDCALESHSREVIRCAPEGTAEKVLRTQQLS 107

  Fly   298 -------KPQKLMFFTIT--FRPFTPQPGGLEFLPGNDYYFISTSS--KDDLYRRIGGRCSTNNM 351
                   |.||:....:.  .|...|.|.|.|:.||..||:::||:  .:....|:.|.|.:.||
 Worm   108 GGRREDWKKQKVPPKNVAQLIRQLNPIPNGKEYQPGQTYYYMTTSTGKANGTNHRMYGLCESQNM 172

  Fly   352 KVVFKVCCAPEDNNKTTALSNSKSVTDTGGAINVNIANNDESHVNSHGNNIAIGTNIGINGGQII 416
            ::..||..:.....:.......:....|..|                               :::
 Worm   173 RLSMKVSASQPHPTRRAPTRRQEDFVTTASA-------------------------------ELM 206

  Fly   417 GGPQSAGIPINPLSGNNNINGIPTTINSNIDQFNRIPIQPNIIG--NHVGTNAVGTGIVGGGGII 479
            ||.:...      |.|:|.:.:|..:..:.:...|.|.|....|  |......|.....|..|..
 Worm   207 GGQEDED------SDNDNAHLLPRDLEGSTNPKFRRPSQLETAGVENQQFMKVVQMAQAGKTGTF 265

  Fly   480 LTPGHAHGNINMLQPGRGGINGAYPGHHHIQTGIRINNVPTQHNYPSHKGNANSNINGNDDHHHY 544
            .....|....:..:.|...:|..|       ....:||.     |.    ||:..|:...|   :
 Worm   266 ENEKEAIAQKSSEKDGWHPVNVQY-------VADLMNNA-----YQ----NADERISYQRD---F 311

  Fly   545 NKHPNEVVKNEELTYNSGAATSDGNIFALWIWILSI 580
            ..|....:..:.|.|:| ::||....||:.:.::.:
 Worm   312 EIHEENDLAVKSLEYSS-SSTSLSTNFAILLAVIYV 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 44/165 (27%)
efn-4NP_499947.1 Ephrin 19..178 CDD:459947 44/168 (26%)

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