DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ephrin and efn-4

DIOPT Version :9

Sequence 1:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_499947.1 Gene:efn-4 / 176882 WormBaseID:WBGene00001165 Length:348 Species:Caenorhabditis elegans


Alignment Length:426 Identity:89/426 - (20%)
Similarity:149/426 - (34%) Gaps:107/426 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 MIPFPKFGATSFVTLLTLICMETVLLSTMSSCAKTFYMHWNTSNSIFRIDNTDHIIDVNKGNLAF 246
            |..|.:|..|:|: ||.|            :.|....::||::||:||  |....|:|..|    
 Worm     1 MKQFFEFLITTFL-LLGL------------AAADEHIVYWNSTNSLFR--NRQPTIEVRMG---- 46

  Fly   247 EFDQVHIICPVYEPGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICD-------------- 297
              |.|..:||..|.|  .|:.|..|:|.|::...:.|.:.:....||....              
 Worm    47 --DVVRFVCPDNEEG--RNDGEYLIVYEVTEFAMDDCALESHSREVIRCAPEGTAEKVLRTQQLS 107

  Fly   298 -------KPQKLMFFTIT--FRPFTPQPGGLEFLPGNDYYFISTSS--KDDLYRRIGGRCSTNNM 351
                   |.||:....:.  .|...|.|.|.|:.||..||:::||:  .:....|:.|.|.:.||
 Worm   108 GGRREDWKKQKVPPKNVAQLIRQLNPIPNGKEYQPGQTYYYMTTSTGKANGTNHRMYGLCESQNM 172

  Fly   352 KVVFKVCCAPEDNNKTTALSNSKSVTDTGGAINVNIANNDESHVNSHGNNIAIGTNIGINGGQII 416
            ::..||..:.....:.......:....|..|                               :::
 Worm   173 RLSMKVSASQPHPTRRAPTRRQEDFVTTASA-------------------------------ELM 206

  Fly   417 GGPQSAGIPINPLSGNNNINGIPTTINSNIDQFNRIPIQPNIIG--NHVGTNAVGTGIVGGGGII 479
            ||.:...      |.|:|.:.:|..:..:.:...|.|.|....|  |......|.....|..|..
 Worm   207 GGQEDED------SDNDNAHLLPRDLEGSTNPKFRRPSQLETAGVENQQFMKVVQMAQAGKTGTF 265

  Fly   480 LTPGHAHGNINMLQPGRGGINGAYPGHHHIQTGIRINNVPTQHNYPSHKGNANSNINGNDDHHHY 544
            .....|....:..:.|...:|..|       ....:||.     |.    ||:..|:...|   :
 Worm   266 ENEKEAIAQKSSEKDGWHPVNVQY-------VADLMNNA-----YQ----NADERISYQRD---F 311

  Fly   545 NKHPNEVVKNEELTYNSGAATSDGNIFALWIWILSI 580
            ..|....:..:.|.|:| ::||....||:.:.::.:
 Worm   312 EIHEENDLAVKSLEYSS-SSTSLSTNFAILLAVIYV 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 44/165 (27%)
PigN <557..>622 CDD:282796 7/24 (29%)
efn-4NP_499947.1 Ephrin_ectodomain 23..179 CDD:259861 44/165 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3858
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11304
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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