DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ephrin and Efnb3

DIOPT Version :9

Sequence 1:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_006532223.1 Gene:Efnb3 / 13643 MGIID:109196 Length:351 Species:Mus musculus


Alignment Length:359 Identity:83/359 - (23%)
Similarity:122/359 - (33%) Gaps:113/359 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 DQVHIICP-VYEPGTFENET-EKYIIYNVSKVEYETCRITNADPRVIAICDKPQKLMFFTITFRP 311
            |::.::|| ...||...:.: |.|.:|.|...:...|....| |.::..||:|...:.|||.|:.
Mouse    67 DRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPA-PNLLLTCDRPDLDLRFTIKFQE 130

  Fly   312 FTPQPGGLEFLPGNDYYFISTS--SKDDLYRRIGGRCSTNNMKVVFKVCCAPEDNN-KTTALSNS 373
            ::|...|.||...:|||.|:||  :::.|....||.|.|..|||:.:|..:|.... ....:|..
Mouse   131 YSPNLWGHEFRSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVGQSPRGGAVPRKPVSEM 195

  Fly   374 KSVTDTGGAINV-----NIANNDESHVNSHGNNIAIGTNIGINGGQIIGGPQSAGIPINPLSGNN 433
            ....|.|.|.:.     .|..:..|:..|.|                      |..|:.|     
Mouse   196 PMERDRGAAHSAEPGRDTIPGDPSSNATSRG----------------------AEGPLPP----- 233

  Fly   434 NINGIPTTINSNIDQFNRIPIQPNIIGNHVGTNAVGTGIVGGGGIIL--------------TPGH 484
                               |..|.:.|...|...:..|:.|.||.:.              .|| 
Mouse   234 -------------------PSMPAVAGAAGGMALLLLGVAGAGGAMCWRRRRAKPSESRHPGPG- 278

  Fly   485 AHGNINMLQPGRGGING---AYPGHHHIQTGIRINNVPTQHNYPSHKGNANSNINGNDDH---HH 543
            :.|....|..|.||..|   |.||    :.||.:..                  .|..|.   .|
Mouse   279 SFGRGGSLGLGGGGGMGPREAEPG----ELGIALRG------------------GGTADPPFCPH 321

  Fly   544 YNK------HPNEVVKNEELTYNSGAATSDGNIF 571
            |.|      ||..:|::       |...|..||:
Mouse   322 YEKVSGDYGHPVYIVQD-------GPPQSPPNIY 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 37/112 (33%)
PigN <557..>622 CDD:282796 4/15 (27%)
Efnb3XP_006532223.1 Cupredoxin 51..179 CDD:388514 37/112 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843261
Domainoid 1 1.000 75 1.000 Domainoid score I9027
eggNOG 1 0.900 - - E1_KOG3858
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001210
OrthoInspector 1 1.000 - - otm42715
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11304
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4391
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.870

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