DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ephrin and efnb1

DIOPT Version :9

Sequence 1:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_571880.1 Gene:efnb1 / 114377 ZFINID:ZDB-GENE-010618-2 Length:341 Species:Danio rerio


Alignment Length:433 Identity:100/433 - (23%)
Similarity:154/433 - (35%) Gaps:159/433 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 FVTLLTLIC---------METVLLSTMSSCAKTFYMHWNTSNSIFRIDNTDHIIDVNKGNLAFEF 248
            ::.:||.:|         :|:|:              ||:.|..| :.....:|....|      
Zfish    11 YLWILTAMCRYALPAAKSLESVV--------------WNSQNPKF-VSGKGLVIYPEIG------ 54

  Fly   249 DQVHIICPVYEPGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICDKPQKLMFFTITFRPFT 313
            |::.||||   .|......|.|.:|.|.|.:.|:|. |..||.|:..|:||:|.:.|||.|:.|:
Zfish    55 DKLDIICP---KGDMGRPYEFYKLYLVKKEQAESCS-TILDPNVLVTCNKPEKDIKFTIKFQEFS 115

  Fly   314 PQPGGLEFLPGNDYYFISTS--SKDDLYRRIGGRCSTNNMKVVFKVCCAPE-------------- 362
            |...||||....:||..|||  :::.|..|.||.|||.:||::.||...|.              
Zfish   116 PNYMGLEFKRFTNYYITSTSNGTQEGLENREGGVCSTRSMKIIMKVGQDPNAPDPDLPDLPDRPY 180

  Fly   363 DNNKTTALSNSKSVTDTGGAINVNIANNDESHVNSHGNNIAIGTNIGINGGQIIGGPQSAGIPIN 427
            ||......::....|:.|          .|:.|:.:|:.:                         
Zfish   181 DNEIKDPTTSPSRKTERG----------RENEVDGNGSKM------------------------- 210

  Fly   428 PLSGNNNINGIPTTINSNIDQFNRIPIQPNIIGNHVGTNAVGTGIVGGGGIIL------------ 480
            |.....|.|..|.::.             .|.|:.....|.    :|.|.:|.            
Zfish   211 PGKDTRNQNNSPGSVE-------------GIFGSKPALFAA----IGAGCVIFLLIIIILIVLLL 258

  Fly   481 -----TPGHAHGNINMLQPGRGGINGAYPGHHHIQTGIRINNVPTQHNYPSHKGNANSNI----- 535
                 |..|:       || |||            |.:.::.:.|... .:..|:..|:|     
Zfish   259 KLRKRTRKHS-------QP-RGG------------TALSLSTLATPKG-AAQAGSEPSDIIIPLR 302

  Fly   536 -NGNDDHHHYNK------HPNEVVKNEELTYNSGAATSDGNIF 571
             ..|:...||.|      ||..:|  :|:...|.|     ||:
Zfish   303 TTENNYCPHYEKVSGDYGHPVYIV--QEMPPQSPA-----NIY 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 52/142 (37%)
PigN <557..>622 CDD:282796 4/15 (27%)
efnb1NP_571880.1 Cupredoxin 28..162 CDD:302766 54/158 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588220
Domainoid 1 1.000 87 1.000 Domainoid score I7950
eggNOG 1 0.900 - - E1_KOG3858
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001210
OrthoInspector 1 1.000 - - otm25392
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11304
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4391
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.870

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