DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ephrin and efnb1

DIOPT Version :10

Sequence 1:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_571880.1 Gene:efnb1 / 114377 ZFINID:ZDB-GENE-010618-2 Length:341 Species:Danio rerio


Alignment Length:433 Identity:100/433 - (23%)
Similarity:154/433 - (35%) Gaps:159/433 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 FVTLLTLIC---------METVLLSTMSSCAKTFYMHWNTSNSIFRIDNTDHIIDVNKGNLAFEF 248
            ::.:||.:|         :|:|:              ||:.|..| :.....:|....|      
Zfish    11 YLWILTAMCRYALPAAKSLESVV--------------WNSQNPKF-VSGKGLVIYPEIG------ 54

  Fly   249 DQVHIICPVYEPGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICDKPQKLMFFTITFRPFT 313
            |::.||||   .|......|.|.:|.|.|.:.|:|. |..||.|:..|:||:|.:.|||.|:.|:
Zfish    55 DKLDIICP---KGDMGRPYEFYKLYLVKKEQAESCS-TILDPNVLVTCNKPEKDIKFTIKFQEFS 115

  Fly   314 PQPGGLEFLPGNDYYFISTS--SKDDLYRRIGGRCSTNNMKVVFKVCCAPE-------------- 362
            |...||||....:||..|||  :::.|..|.||.|||.:||::.||...|.              
Zfish   116 PNYMGLEFKRFTNYYITSTSNGTQEGLENREGGVCSTRSMKIIMKVGQDPNAPDPDLPDLPDRPY 180

  Fly   363 DNNKTTALSNSKSVTDTGGAINVNIANNDESHVNSHGNNIAIGTNIGINGGQIIGGPQSAGIPIN 427
            ||......::....|:.|          .|:.|:.:|:.:                         
Zfish   181 DNEIKDPTTSPSRKTERG----------RENEVDGNGSKM------------------------- 210

  Fly   428 PLSGNNNINGIPTTINSNIDQFNRIPIQPNIIGNHVGTNAVGTGIVGGGGIIL------------ 480
            |.....|.|..|.::.             .|.|:.....|.    :|.|.:|.            
Zfish   211 PGKDTRNQNNSPGSVE-------------GIFGSKPALFAA----IGAGCVIFLLIIIILIVLLL 258

  Fly   481 -----TPGHAHGNINMLQPGRGGINGAYPGHHHIQTGIRINNVPTQHNYPSHKGNANSNI----- 535
                 |..|:       || |||            |.:.::.:.|... .:..|:..|:|     
Zfish   259 KLRKRTRKHS-------QP-RGG------------TALSLSTLATPKG-AAQAGSEPSDIIIPLR 302

  Fly   536 -NGNDDHHHYNK------HPNEVVKNEELTYNSGAATSDGNIF 571
             ..|:...||.|      ||..:|  :|:...|.|     ||:
Zfish   303 TTENNYCPHYEKVSGDYGHPVYIV--QEMPPQSPA-----NIY 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 52/142 (37%)
efnb1NP_571880.1 Cupredoxin 28..162 CDD:473140 54/158 (34%)

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