DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ephrin and efnb1

DIOPT Version :10

Sequence 1:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_002934941.1 Gene:efnb1 / 100494328 XenbaseID:XB-GENE-1011783 Length:328 Species:Xenopus tropicalis


Alignment Length:377 Identity:98/377 - (25%)
Similarity:138/377 - (36%) Gaps:97/377 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 LLTLICMETVLLSTMSSCAKTFY-MHWNTSNSIFRIDNTDHIIDVNKGNLAFE--FDQVHIICPV 257
            |..|:.:..||....|:..|... :.|::.|..|.         ..||.:.:.  .|::.||||.
 Frog     4 LRQLLGLLLVLYRLCSALGKNLEPVTWHSQNPRFL---------SGKGLVLYPEIGDRLDIICPK 59

  Fly   258 YEPGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICDKPQKLMFFTITFRPFTPQPGGLEFL 322
            .:|   ....|.|.:|.|.:.:.|:|. |..||.|:..|::|.|...|||.|:.|:|...||||.
 Frog    60 GDP---SQPYEYYKLYMVRRDQLESCS-TVMDPNVLVTCNQPGKEYRFTIKFQEFSPNYMGLEFR 120

  Fly   323 PGNDYYFISTS--SKDDLYRRIGGRCSTNNMKVVFKV-----CCAPEDNNKTTALSNSKSVTDTG 380
            ...||:..|||  :...|..|.||.|.|.:||::.||     ..|||   :.|....||...:||
 Frog   121 RNVDYFITSTSNGTLQGLENREGGVCQTRSMKIIMKVGQDPNSVAPE---QLTTTRPSKEADNTG 182

  Fly   381 GAINVNIANNDESHVNSHGNNIAIGTNIGINGGQIIGGPQSAGIPINPLSGNNNINGIPTTINSN 445
            ........|..|:|                       |.........|.||    .|:....||.
 Frog   183 KIATFGPWNGAENH-----------------------GKPDTNQSDKPTSG----GGVDGFFNSK 220

  Fly   446 IDQFNRIPIQPNIIGNHVGTNAVGTGIVGGGGIIL----------------TPGHAHG-NINML- 492
            |..|                .|:|.|.|....||:                |...|.| :::.| 
 Frog   221 IAVF----------------AAIGAGCVIFILIIIFLVVLLIKIRKRHRKHTQQRAPGLSLSTLA 269

  Fly   493 QPGRGGINGAYPGHHHIQTGIRINNVPTQHNYPSHKGNANSNINGNDDHHHY 544
            .|...|..|..|      :.|.|....|::||..|    ...::|:..|..|
 Frog   270 SPKCSGNAGTEP------SDIIIPLRTTENNYCPH----YEKVSGDYGHPVY 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 49/150 (33%)
efnb1XP_002934941.1 Ephrin-B_Ectodomain 24..158 CDD:259897 48/146 (33%)

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