DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ephrin and efna4

DIOPT Version :10

Sequence 1:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_031747148.1 Gene:efna4 / 100379980 XenbaseID:XB-GENE-5944363 Length:219 Species:Xenopus tropicalis


Alignment Length:204 Identity:56/204 - (27%)
Similarity:84/204 - (41%) Gaps:35/204 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 MHWNTSNSIFRIDNTDHIIDVNKGNLAFEFDQVHIICPVYEPGTFENETEKYIIYNVSKVEYETC 283
            ::||::|..|..|:....:::|        |.:.|.||.|:.......||.:::|.|.:..||.|
 Frog    30 VYWNSTNPRFLKDDYSVKMEIN--------DYLDIYCPHYDSRVPAEHTEAFVLYMVDREGYEGC 86

  Fly   284 RITNADPRVIA--ICDKPQKLMFFTITF----RPFTPQPGGLEFLPGNDYYFISTSSKDDLYRRI 342
            ..|   |....  .|::|. ..|..|.|    :.|||...|.||.||.|||:||....|.     
 Frog    87 YET---PGAFKRWECNRPH-APFGPIKFSEKIQRFTPFSLGFEFRPGEDYYYISIPEPDS----- 142

  Fly   343 GGRCSTNNMKVVFKVCCAPEDNNKTTALSNSKSVTDTGGAINVNIANNDESHVNSHGNNIAIGTN 407
            .|.|    :|:...|||.|......|.:..|:   ..||.   .:|  ||...:..|...::.|.
 Frog   143 PGEC----LKLRVSVCCRPTTVGPVTEVPKSQ---PRGGP---RVA--DEGRTSGQGGGWSLQTE 195

  Fly   408 IGINGGQII 416
            ....|..::
 Frog   196 ARPRGVTVL 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 42/144 (29%)
efna4XP_031747148.1 Ephrin-A_Ectodomain 27..154 CDD:259896 42/144 (29%)

Return to query results.
Submit another query.