DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ephrin and efnb2

DIOPT Version :10

Sequence 1:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001093709.1 Gene:efnb2 / 100101723 XenbaseID:XB-GENE-488606 Length:329 Species:Xenopus tropicalis


Alignment Length:282 Identity:82/282 - (29%)
Similarity:122/282 - (43%) Gaps:65/282 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 ICMETVLLSTMSSCAKTF-YMHWNTSNSIFRIDNTDHIIDVNKGNLAFEFDQVHIICPVYEPGTF 263
            :|:  :||.|..|.:... .::||:||:.| :.....|:....|      |::.||||..:..: 
 Frog    15 VCI--LLLRTAISWSTVLDPIYWNSSNARF-LPGQGLILYPKIG------DKLDIICPKVDSKS- 69

  Fly   264 ENETEKYIIYNVSKVEYETCRITNADPRVIAICDKPQKLMFFTITFRPFTPQPGGLEFLPGNDYY 328
            .::.|.|.||.|.|.:.::|.|.:..|  :..|.||.:.:.|||.|:.|:|...||||....|||
 Frog    70 TSQYEYYKIYLVDKEQADSCSIKDKTP--LLNCAKPDQDVKFTIKFQEFSPNLWGLEFQRDKDYY 132

  Fly   329 FISTS--SKDDLYRRIGGRCSTNNMKVVFKVCCAPE-------------DNNKTTALSNSKSVTD 378
            .||||  |.:.:..:.||.|.|..||::.||...|:             |....|   |.||.| 
 Frog   133 IISTSNGSLEGVDNQEGGVCVTKAMKILMKVGQDPDFHIHQGSSSTRRPDQESGT---NGKSST- 193

  Fly   379 TGGAINVNIANNDESHVNSH----GNNIAIGTNIGINGGQII---------------------GG 418
            |...:|.....:.|.|...|    |:.:|:..  ||..|.||                     ..
 Frog   194 TSPHVNGPKGPSTEGHNAGHSSILGSEVALFA--GIASGCIIFIVIIITLVVLLLKYRRRHRKHS 256

  Fly   419 PQ-SAGIPINPL-----SGNNN 434
            || :..:.::.|     |||||
 Frog   257 PQHTTTLSLSTLATPKRSGNNN 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 49/143 (34%)
efnb2NP_001093709.1 Ephrin-B_Ectodomain 29..164 CDD:259897 49/144 (34%)

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