DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34124 and Eml4

DIOPT Version :9

Sequence 1:NP_001036333.1 Gene:CG34124 / 4379887 FlyBaseID:FBgn0083960 Length:2003 Species:Drosophila melanogaster
Sequence 2:XP_006525218.1 Gene:Eml4 / 78798 MGIID:1926048 Length:999 Species:Mus musculus


Alignment Length:761 Identity:151/761 - (19%)
Similarity:273/761 - (35%) Gaps:192/761 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDTTQESDLLGE---------------EEELENENDV--SFPRDIVSVEHSFGY---DCKKLFNL 45
            |.|.:::...||               ..:::|.:|:  ..|.:.:.:|..:||   ||:.  |:
Mouse   236 MSTREKNSQEGEYIKMFMRGRPITMFIPSDVDNYDDIRTELPPEKLKLEWVYGYRGKDCRA--NV 298

  Fly    46 VLVDSDTLVFASGNFLNYFS----ISRQEISFQETVYGCGVGFITKNEHPDYTNLFT-----VGE 101
            .|:.:..:|:...:.:..|:    ..|..:...:.|....|       |||...:.|     |.:
Mouse   299 YLLPTGEIVYFIASVVVLFNYEERTQRHYLGHTDCVRCLAV-------HPDKIRIATGQIAGVDK 356

  Fly   102 NG--ARPTVFIYEYPSLNVRVKLLNAAQNCFTAGSYNK-TGELFASQA----------GYPDFII 153
            :|  .:|.|.:::..||        ...:....|::.: .|.|..|:|          ...:.::
Mouse   357 DGRPLQPHVRVWDSVSL--------TTLHVIGLGTFERGVGCLDFSKADSGVHLCVIDDSNEHML 413

  Fly   154 TIWRWENAEVVLRAKSFQSDILFVHF--SEHNPILLCSSGLSHIKFWKMANTFTGLKL---KGDL 213
            |:|.|:....:...|:....:|.|.|  ::.|.|:.|  |.|||.||    |::|..|   :|..
Mouse   414 TVWDWQKKSKIAEIKTTNEVVLAVEFHPTDANTIITC--GKSHIFFW----TWSGNSLTRKQGIF 472

  Fly   214 GRFGKTDFSDIYAMYMLQDENVISGSDWGNMLLWQAGLIK----------FEICRKGRKPCHTKP 268
            |::.|..|  :..:..|.:.:|::|...|.||:|...:::          ::|.|:.:  .|...
Mouse   473 GKYEKPKF--VQCLAFLGNGDVLTGDSGGVMLIWSKTMVEPPPGKGPKGVYQINRQIK--AHDGS 533

  Fly   269 I-TRITMKNGEVTT-VGMDGYVRVWYWETVDLADPPEDDLFVEIDPIYEFKIAD--------VEL 323
            : |...|:||.:.| .|.|..:.:|           :.||.:|    .|.::.|        .|.
Mouse   534 VFTLCQMRNGMLLTGGGKDRKIILW-----------DHDLNLE----REIEVPDQYGTIRAVAEG 583

  Fly   324 RCMQKI---------------------------------HPFDESDFTHYAQDGNGGIWFCDINT 355
            |..|.:                                 |||.:...| .|||....:|    |:
Mouse   584 RAEQFLVGTSRNFILRGTFNDGFQIEVQGHTDELWGLATHPFKDLLLT-CAQDRQVCMW----NS 643

  Fly   356 YDVPQKPRKLYSCIGGKVLAAQMSPVSPHFLCMSESGKLFVYQYDEQRLILEKEFPAEGVDVIWL 420
            .:...:..:|....|.   .|...|........:.||:.||...:.:.|:.......|.:.|:  
Mouse   644 VEHRLEWTRLVDEPGH---CADFHPSGTVVAIGTHSGRWFVLDAETRDLVSIHTDGNEQLSVM-- 703

  Fly   421 DTNISVKGTELVAAFKDGILRQMYLDLSNGERPKMTRVRAFKAHTSPITALTVSRNSSLLLTGSA 485
              ..||.||.|.....|..: .:|..|.||.  |.:|......|:|.||.|..|.::..:::.|.
Mouse   704 --RYSVDGTLLAVGSHDNFI-YLYTVLENGR--KYSRYGKCTGHSSYITHLDWSPDNKHIMSNSG 763

  Fly   486 DKSIFIYQL--------SRDEHQMVDMRP----LGFVQFAAIP--------NCFYWHETEPTVVL 530
            |..|..:.:        :|.:.:.:|...    |||..|...|        |..........:.:
Mouse   764 DYEILYWDIENGCKLIRNRSDCKDIDWTTYTCVLGFQVFGVWPEGSDGTDINALVRSHNRRVIAV 828

  Fly   531 VG--CKSGDLYEYNIRTEVTDHETYLSYNITENSRMRHTKFASIKSRIRRDIHRENVKKRKERKR 593
            ..  ||. .|::|...........|.::    :|.:.:..|.      ..|.|..:...:.....
Mouse   829 ADDFCKV-HLFQYPCSKAKAPSHKYSAH----SSHVTNVSFT------HNDSHLISTGGKDMSII 882

  Fly   594 ERKMNEVEKLKKANPGLQIDIESALADSEPDEEEEPLHIPTVPNAI 639
            :.|:  ||||......:..|.......:...|...|.:.|.:|.::
Mouse   883 QWKL--VEKLPVPQNEVITDASVTKTPASSSETARPSNSPPLPPSL 926

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34124NP_001036333.1 WD40 repeat 90..124 CDD:293791 10/40 (25%)
WD40 repeat 131..166 CDD:293791 8/45 (18%)
WD40 135..493 CDD:295369 94/426 (22%)
WD40 163..574 CDD:225201 102/490 (21%)
WD40 repeat 174..217 CDD:293791 17/47 (36%)
WD40 repeat 270..318 CDD:293791 12/48 (25%)
WD40 repeat 323..370 CDD:293791 12/79 (15%)
WD40 repeat 414..462 CDD:293791 13/47 (28%)
WD40 repeat 468..511 CDD:293791 12/54 (22%)
Eml4XP_006525218.1 HELP 247..318 CDD:367505 12/72 (17%)
WD40 325..678 CDD:392136 81/400 (20%)
WD40 repeat 335..383 CDD:293791 11/62 (18%)
WD40 repeat 388..428 CDD:293791 7/39 (18%)
WD40 repeat 435..472 CDD:293791 16/42 (38%)
WD40 repeat 481..529 CDD:293791 9/49 (18%)
WD40 525..885 CDD:392136 76/402 (19%)
WD40 repeat 535..572 CDD:293791 12/51 (24%)
WD40 repeat 577..612 CDD:293791 3/34 (9%)
WD40 repeat 618..655 CDD:293791 10/41 (24%)
WD40 repeat 660..695 CDD:293791 7/34 (21%)
WD40 repeat 701..741 CDD:293791 13/46 (28%)
WD40 repeat 746..781 CDD:293791 7/34 (21%)
WD40 repeat 814..851 CDD:293791 5/37 (14%)
WD40 repeat 859..886 CDD:293791 3/32 (9%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2106
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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