DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34124 and eml2

DIOPT Version :9

Sequence 1:NP_001036333.1 Gene:CG34124 / 4379887 FlyBaseID:FBgn0083960 Length:2003 Species:Drosophila melanogaster
Sequence 2:NP_001025406.1 Gene:eml2 / 569375 ZFINID:ZDB-GENE-050706-71 Length:805 Species:Danio rerio


Alignment Length:615 Identity:135/615 - (21%)
Similarity:224/615 - (36%) Gaps:141/615 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TTQESDLLGEEEELENENDVSFPRDIVSVEHSFGY---DCKKLFNLVLVDSDTLVFASGNFLNYF 64
            ||...|.|.:...||::  |:.|...:.::..:||   ||:.  ||.|:.:..:|:.:.:.:..:
Zfish   187 TTHIPDQLRDSYSLESK--VALPERKLKLQWVYGYRGRDCRS--NLYLLPTGEIVYFNASVVVLY 247

  Fly    65 SISRQE----ISFQETVYGCGVGFITKNEHPDYTNLFT-----VGENGAR--PTVFIYEYPSLN- 117
            ::..|:    :...:.|....:       |||...:.|     ..::|..  |.|.:::..||| 
Zfish   248 NVEEQQQRHYLGHNDDVKCLAI-------HPDMVTIATGQVAGTSKDGKALPPHVRVWDSVSLNT 305

  Fly   118 ---VRVKLLNAAQNCFTAGSYNKTGELFASQAGYPDFIITIWRWENAEVVLRAKSFQSDIL--FV 177
               :...:.:.|..|......|....|.|.... .|.|:::|.|:..:.:...|.....:|  ..
Zfish   306 LHVIGAGVFDRAVTCVAFSKSNGGAHLCAVDDA-NDHILSVWDWQKEKQLAEVKCSNDSVLGAVF 369

  Fly   178 HFSEHNPILLCSSGLSHIKFWKMANTFTGLKLKGDLGRFGKTDFSDIYAMYMLQDEN--VISGSD 240
            |..|.|.|:.|  |.|||.||    |..|..|....|.|.|.: ...|.:.:...||  .|:|..
Zfish   370 HPMEANLIVTC--GKSHINFW----TVEGSTLTKRQGLFEKHE-KPKYVLCIAFAENGDAITGDS 427

  Fly   241 WGNMLLWQAG---LIK----------FEICRKGRKPCHTKPITRITMKNGE-VTTVGMDGYVRVW 291
            .||:.:|..|   :.|          |.:|               .:|:|. |:..|.|..|.:|
Zfish   428 SGNIYIWAKGGNRISKVVSGAHEGGIFSLC---------------VLKDGTLVSGGGKDRKVLLW 477

  Fly   292 ---------------YWETVDLADPPEDDLFV--------------EIDPIYEFKIADVELRCMQ 327
                           :.....||:..:|:|||              .:.||.:....  ||..:.
Zfish   478 DHDYRKKSEMEVPEAFGPVRTLAEGKQDELFVGTTKNAVLRGSFSGSLTPIVQGHTD--ELWGLD 540

  Fly   328 KIHPFDESDFTHYAQDGNGGIW-FCD---INTYDVPQKPRKLYSCIGGKVLAAQMSPVSPHFLCM 388
             :||..| .|....||....:| .|.   :.|..:....|.:.....|.|:|..           
Zfish   541 -VHPSTE-QFVTCGQDKQVCLWDTCSHLPLWTKAIEDPARSVGFHPSGTVVAVG----------- 592

  Fly   389 SESGKLFVYQYDEQRLILEKEFPAEGVDVIWLDTNISVKGTELVAAFKDGILRQMYLDLSNGERP 453
            :.:.|..|...|.:.|:   ....:|.::|.: ...|..|..|.....|..: .:|....||:  
Zfish   593 TMTAKWLVLDTDTRDLV---SMHTDGNEIISV-VKYSPDGAYLAVGSHDNFV-YIYSVTENGK-- 650

  Fly   454 KMTRVRAFKAHTSPITALTVSRNSSLLLTGSADKSIFIYQLSRDEH-----------QMVDMRPL 507
            |.:||.....|:|.:|.|..|.:|..::|.|.|..|..::.|..:|           .......|
Zfish   651 KYSRVGKCTGHSSFVTHLDWSTDSQFIVTNSGDYEILYWEASSGKHITNNDIVRNLEWATSTCVL 715

  Fly   508 GFVQFAAIPNCFYWHETEPTVVLVGCKSGD 537
            ||..|...|:     ..:.|.:...|:|.|
Zfish   716 GFSVFGIWPD-----GADGTDINAVCRSHD 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34124NP_001036333.1 WD40 repeat 90..124 CDD:293791 10/44 (23%)
WD40 repeat 131..166 CDD:293791 7/34 (21%)
WD40 135..493 CDD:295369 94/408 (23%)
WD40 163..574 CDD:225201 98/437 (22%)
WD40 repeat 174..217 CDD:293791 16/44 (36%)
WD40 repeat 270..318 CDD:293791 15/77 (19%)
WD40 repeat 323..370 CDD:293791 11/50 (22%)
WD40 repeat 414..462 CDD:293791 12/47 (26%)
WD40 repeat 468..511 CDD:293791 13/53 (25%)
eml2NP_001025406.1 HELP 175..248 CDD:281450 16/64 (25%)
WD40 232..697 CDD:225201 110/516 (21%)
WD40 255..561 CDD:295369 74/339 (22%)
WD40 repeat 264..310 CDD:293791 11/52 (21%)
WD40 repeat 319..358 CDD:293791 8/39 (21%)
WD40 repeat 367..404 CDD:293791 16/42 (38%)
WD40 repeat 412..448 CDD:293791 9/35 (26%)
WD40 449..802 CDD:295369 69/334 (21%)
WD40 repeat 453..518 CDD:293791 15/79 (19%)
WD40 repeat 537..572 CDD:293791 9/36 (25%)
WD40 repeat 579..614 CDD:293791 7/48 (15%)
WD40 repeat 619..659 CDD:293791 11/43 (26%)
WD40 650..>802 CDD:225201 24/98 (24%)
WD40 repeat 665..689 CDD:293791 8/23 (35%)
WD40 repeat 732..769 CDD:293791 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2106
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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