DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34124 and eml1

DIOPT Version :9

Sequence 1:NP_001036333.1 Gene:CG34124 / 4379887 FlyBaseID:FBgn0083960 Length:2003 Species:Drosophila melanogaster
Sequence 2:XP_012823784.1 Gene:eml1 / 548488 XenbaseID:XB-GENE-949779 Length:815 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34124NP_001036333.1 WD40 repeat 90..124 CDD:293791
WD40 repeat 131..166 CDD:293791
WD40 135..493 CDD:295369
WD40 163..574 CDD:225201
WD40 repeat 174..217 CDD:293791
WD40 repeat 270..318 CDD:293791
WD40 repeat 323..370 CDD:293791
WD40 repeat 414..462 CDD:293791
WD40 repeat 468..511 CDD:293791
eml1XP_012823784.1 HELP 174..247 CDD:367505
WD40 repeat 221..258 CDD:293791
WD40 256..655 CDD:225201
WD40 repeat 263..309 CDD:293791
WD40 repeat 318..360 CDD:293791
WD40 repeat 367..412 CDD:293791
WD40 repeat 420..452 CDD:293791
WD40 repeat 463..500 CDD:293791
WD40 repeat 505..541 CDD:293791
WD40 repeat 547..582 CDD:293791
WD40 repeat 589..621 CDD:293791
WD40 repeat 629..669 CDD:293791
WD40 661..>814 CDD:225201
WD40 repeat 675..699 CDD:293791
WD40 repeat 742..781 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.