DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34124 and eml4

DIOPT Version :9

Sequence 1:NP_001036333.1 Gene:CG34124 / 4379887 FlyBaseID:FBgn0083960 Length:2003 Species:Drosophila melanogaster
Sequence 2:XP_031757517.1 Gene:eml4 / 448764 XenbaseID:XB-GENE-971027 Length:999 Species:Xenopus tropicalis


Alignment Length:973 Identity:163/973 - (16%)
Similarity:304/973 - (31%) Gaps:380/973 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDTTQESDLLGE---------------EEELENENDV--SFPRDIVSVEHSFGY---DCKKLFNL 45
            |.|.:::...||               ..::||.:|:  ..|.:.:.:|..|||   ||:.  |:
 Frog   225 MSTREKNSQEGEYIKMFMRGRPITMFIPSDVENYDDIRTELPPEKLKLEWVFGYRGRDCRA--NV 287

  Fly    46 VLVDSDTLVFASGNFLNYFS----ISRQEISFQETVYGCGVGFITKNEHPDYTNLFT-----VGE 101
            .|:.:..:|:...:.:..|:    ..|..:...:.|....|       |||...:.|     |.:
 Frog   288 YLLPTGEIVYFIASVVVLFNYEERTQRHYLGHTDCVKCIAV-------HPDKIRIATGQIAGVDK 345

  Fly   102 NG--ARPTVFIYEYPSLN----VRVKLLNAAQNCFTAGSYNKTGELFASQAGYPDFIITIWRWEN 160
            :|  .:|.|.:::..||:    :.:........|. |.|...:|...:......:.::|:|.|:.
 Frog   346 DGRPLQPHVRVWDSVSLSTLQVIGLGTFERGVGCL-AFSKADSGVHLSVIDDSNEHMLTVWDWQK 409

  Fly   161 AEVVLRAKSFQSDILFVHFSEHNPILLCSSGLSHIKFWKMANTFTGLKL---KGDLGRFGKTDFS 222
            ...:...|:....:|.|.|...:...:.:.|.|||.||    |::|..|   :|..|::.|..| 
 Frog   410 KSKIAEIKTTNEVVLTVEFHPTDACTIVTCGKSHIFFW----TWSGNSLARKQGIFGKYEKPKF- 469

  Fly   223 DIYAMYMLQDENVISGSDWGNMLLWQAGLIKFEICRKGRKPCHTKPITR------------ITMK 275
             :..:..|.:.:|::|...|.||:|....:: ....||.|......|:|            ..|:
 Frog   470 -VQCLAFLANGDVLAGDSGGVMLIWSKTTVE-STASKGAKVLGVYQISRQIKAHDGSVFTLCQMR 532

  Fly   276 NGEVTT-VGMDGYVRVWYWETVDLADPPEDDLFVEIDPIYEFKIADVELRCMQKIHPFDESDFTH 339
            ||.:.| .|.|..|.:|           :.||    :|..|.::.|                   
 Frog   533 NGMLLTGGGKDRKVIMW-----------DHDL----NPEREIEVPD------------------- 563

  Fly   340 YAQDGNGGIWFCDINTYDVPQKPRKLYSCIGGKVLAAQMSPVSPHFLCMSESGKLFVYQYDEQRL 404
                                                                      ||...|.
 Frog   564 ----------------------------------------------------------QYGTIRA 570

  Fly   405 ILEKEFPAEGVD---VIWLDTNISVKGTELVAAFKDGILRQMYLDLSNGERPKMTRVRAFKAHTS 466
            :      |||..   :|....|..::||     |.||...::                  :.||.
 Frog   571 V------AEGKGDQFLIGTSRNFILRGT-----FNDGFQVEV------------------QGHTD 606

  Fly   467 PITALTVSRNSSLLLTGSADKSIFIYQLSRDEHQMVDMRPL---GFVQFAAIPNCFYWHETEPTV 528
            .:..|.......||||.:.||.:.::  :..:|.:...|.|   |        :|..:|.| .||
 Frog   607 ELWGLATHPFKDLLLTCAQDKQVCLW--NSVDHSLEWTRVLDEPG--------HCADFHPT-GTV 660

  Fly   529 VLVGCKSGDLYEYNIRTE--------------------------VTDHETYL-SYNITENSRMRH 566
            |.:|..||..:..:..|.                          |..|:.:: .||::||.| ::
 Frog   661 VAIGTHSGRWFVLDAETRDLVSIHTDGNEQLSVMRYSVDGALLAVGSHDNFIYLYNVSENGR-KY 724

  Fly   567 TKFASIKSRIRRDIHRENVKKRKERKRERKMNEVEKLKKANPGLQIDIESALADSEPDEEEEPLH 631
            :::...........|                                     .|..||.:     
 Frog   725 SRYGKCTGHSSYITH-------------------------------------LDWSPDNQ----- 747

  Fly   632 IPTVPNAIIWLRYTLRDTIWVSMAGYDAGYIYELEFNAAEPTRATII---AEADDIEIHSYCIID 693
                        |.:.::     ..|:..| :::      |:...:|   ::..||...:|..:.
 Frog   748 ------------YIMSNS-----GDYEILY-WDI------PSGCKLIRNRSDCKDINWATYTCVL 788

  Fly   694 EFIIFGL----------------HNGRIRINRINPDNFTDLSEFRIYP---------MHDGLKGT 733
            .|.:||:                ||.::   ....|:|..:..|: ||         .:......
 Frog   789 GFQVFGVWPEGSDGTDINALVRSHNRKV---IALADDFCKVHLFQ-YPCSKPKAPSHKYSAHSSH 849

  Fly   734 IPKIDISYSGEHLLTIGYDGNVFLHKW---------------------NGPKIVRNKVRDKLPP- 776
            :..:..::...||::.| ..::.:.:|                     |.|.:....::...|. 
 Frog   850 VTNVSFTHKDSHLISTG-GKDMSIMQWRLIEKVSHSQNDNIVESSSAVNSPVVTEKPLQPNTPTN 913

  Fly   777 LPEGVTQIP-------------------------DIEPEACSLEQEKINAELRRQQEAADAHD 814
            ||:.|.::|                         :::.|.||.:.|..|.:....:.:.|..|
 Frog   914 LPQAVNEVPKEDDKTPAESPVPAEDALEQPEELNEVQSEKCSSQPEGANGQEPSNEVSEDPTD 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34124NP_001036333.1 WD40 repeat 90..124 CDD:293791 10/44 (23%)
WD40 repeat 131..166 CDD:293791 6/34 (18%)
WD40 135..493 CDD:295369 68/376 (18%)
WD40 163..574 CDD:225201 85/459 (19%)
WD40 repeat 174..217 CDD:293791 14/45 (31%)
WD40 repeat 270..318 CDD:293791 13/60 (22%)
WD40 repeat 323..370 CDD:293791 0/46 (0%)
WD40 repeat 414..462 CDD:293791 8/50 (16%)
WD40 repeat 468..511 CDD:293791 11/45 (24%)
eml4XP_031757517.1 TD_EMAP4 6..64 CDD:409271
HELP 236..307 CDD:397490 14/72 (19%)
WD40 314..669 CDD:421866 96/501 (19%)
WD40 repeat 324..372 CDD:293791 11/54 (20%)
WD40 repeat 377..417 CDD:293791 7/40 (18%)
WD40 repeat 424..461 CDD:293791 13/40 (33%)
WD40 repeat 470..520 CDD:293791 12/50 (24%)
WD40 515..876 CDD:421866 82/564 (15%)
WD40 repeat 526..561 CDD:293791 12/49 (24%)
WD40 repeat 566..603 CDD:293791 11/65 (17%)
WD40 repeat 609..646 CDD:293791 9/38 (24%)
WD40 repeat 649..682 CDD:293791 11/41 (27%)
WD40 repeat 690..731 CDD:293791 7/41 (17%)
WD40 repeat 737..761 CDD:293791 7/83 (8%)
WD40 repeat 805..844 CDD:293791 7/42 (17%)
WD40 repeat 850..877 CDD:293791 4/27 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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