DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34124 and Eml5

DIOPT Version :9

Sequence 1:NP_001036333.1 Gene:CG34124 / 4379887 FlyBaseID:FBgn0083960 Length:2003 Species:Drosophila melanogaster
Sequence 2:NP_001003402.2 Gene:Eml5 / 444982 RGDID:1303275 Length:1977 Species:Rattus norvegicus


Alignment Length:937 Identity:183/937 - (19%)
Similarity:321/937 - (34%) Gaps:291/937 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SFPRDIVSVEHSFGY---DCKKLFNLVLVDSDTLVFASGNFLNYFSISRQEISFQETVYGCGVGF 84
            |.|...:.:|..:||   .|:.  ||                 |::.:::.:.|   |.|.||.:
  Rat     5 SAPSCHLRLEWVYGYRGHQCRN--NL-----------------YYTAAKEIVYF---VAGVGVVY 47

  Fly    85 ITKNE-----------------HPDYTNLFTVGENGARPTVFIYEYPSLNVRVKLLNAAQNCFTA 132
            ..:..                 ||:.. |...|:.|..|.:.:::    :..|:.::..::..|.
  Rat    48 SPREHRQKFYRGHSDDIISLALHPERV-LVATGQVGKEPYICVWD----SYTVQTVSVLKDVHTH 107

  Fly   133 G----SYNKTGELFASQAGYPDFIITIWRWENAEVVLRAKSFQSDILFVHFSEHNPILLCSSGLS 193
            |    :::..|:...|........:.:|.|:..:::..|......|..:.:..:.|..|.|.|:.
  Rat   108 GIACLAFDLDGQRLVSVGLDSKNAVCVWDWKRGKMLSMAPGHTDRIFDISWDLYQPNKLVSCGVK 172

  Fly   194 HIKFWKMANTFTGLKLKGDLGRFGKT-DFSDIYAMYMLQDENVISGSDWGNMLLWQ--------- 248
            |||||.:.    |..|....|.|||| |...|..:...:||...||:..|::.:|:         
  Rat   173 HIKFWSLC----GNALTPKRGVFGKTGDLQTILCLACARDELTYSGALNGDIYVWKGINLIRTIQ 233

  Fly   249 ----AGLIKFEICRK-----GRKPC------HTKPITRITMK----------------NGEVTTV 282
                ||:.....|.:     ||..|      ..||||.|.::                .|:...|
  Rat   234 GAHTAGIFSMNACEEGFATGGRDGCIRLWDLTFKPITVIDLRETEQGYKGLSVRSVCWRGDHILV 298

  Fly   283 G--------------------MDGYVRVWYW-----ETVDLADPPEDDLFVEIDPIYEFKI---- 318
            |                    |.|:.....|     .|..||....||..|.|..:.:..:    
  Rat   299 GTQDSEIFEIVVHERNKPFLIMQGHCEGELWALAVHPTKPLAVTGSDDRSVRIWSLVDHALIARC 363

  Fly   319 -ADVELRC---------------------------MQKIHPFDESDFTH---YAQDGNGGIWFCD 352
             .|..:||                           .:.:|..|..:..|   |:.||......|:
  Rat   364 NMDEPIRCAAVNADGVHLALGMKDGSLTVLRVRDMTEVVHIKDRKEAIHELKYSPDGTYLAVGCN 428

  Fly   353 ---INTYDVPQKPRKLYSCIGGKVLAAQM--SPVSPHFLCMSESGKLFVYQYDEQRLILEKEFPA 412
               ::.|.|.|:.:|:..|:|.......:  |..|.:......|||..:|:....:.:..|| ..
  Rat   429 DSSVDIYGVAQRYKKVGECVGSLSFITHLDWSSDSKYLQTNDGSGKRLLYKMPGGKEVTSKE-EV 492

  Fly   413 EG-------------VDVIW-----------LDTNISVKGTELVAAFKDGILRQM-YLDLSNGER 452
            :|             |:.||           :|.|  ..|..||.|...|:::.. |..|..|  
  Rat   493 KGMHWASWTCVAGLEVNGIWPKYSDINDINSVDGN--YVGQVLVTADDYGVVKLFRYPCLRKG-- 553

  Fly   453 PKMTRVRAFKAHTSPITALTVSRNSSLLLT-GSADKSIFIYQLSRDEHQMVDMRPLGFVQFAAIP 516
               .:.|.:..|::.:|.:..|.:...::: |.||.|:|.::.. .|.::.|...:.        
  Rat   554 ---AKFRKYIGHSAHVTNVRWSHDYQWVISIGGADHSVFQWKFI-PERKLKDALHIA-------- 606

  Fly   517 NCFYWHETEPTVVLVGCKS----GDLYEYNIRTEVTDHETYLSYNITENSRMRHTKFASIKSRIR 577
                     |...|....|    .||.:........:.||.|:|:                    
  Rat   607 ---------PQESLTESNSDESDSDLSDVPELDSEIEQETQLTYH-------------------- 642

  Fly   578 RDIHRENVKKRKERKRERKMNEVEKLKKANPGLQIDIESALADSEPDEEEEPLHIPTVPNAIIWL 642
            |.:::|::.:.||:.:|::.:...|.::..||..|                .||.      |...
  Rat   643 RQVYKEDLPQLKEQCKEKQKSATSKRRERAPGNSI----------------RLHF------IHGY 685

  Fly   643 R-YTLRDTIWVSMAG---YD---AGYIYELEFNAAEPTRATIIAEADDI---EIHSYCIIDEFII 697
            | |..|..::.:..|   |.   .|.||    |..:.|:...:...|||   .||.   :.:::.
  Rat   686 RGYDCRSNLFYTQIGEIVYHVAAVGVIY----NRQQNTQRFYLGHDDDILCLAIHP---LKDYVA 743

  Fly   698 FGLHNGRIRINRINPDNFTDLSEFRIYPMHDGLKGTIPKIDISYSGEHLLTIGYDGN--VFLHKW 760
            .|.......|:..:.:....||..:.|..:.     |..:|.|..|:.|.::|.|.:  :.|..|
  Rat   744 TGQVGRDPSIHVWDTETIKPLSILKGYHQYG-----ICAVDFSADGKRLASVGIDDSHTIVLWDW 803

  Fly   761 -NGPKI-VRNKVRDKL------PPLPE 779
             .|.|: |....:||:      |.:|:
  Rat   804 KKGEKLSVARGSKDKIFVVKMNPYVPD 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34124NP_001036333.1 WD40 repeat 90..124 CDD:293791 7/33 (21%)
WD40 repeat 131..166 CDD:293791 6/38 (16%)
WD40 135..493 CDD:295369 101/489 (21%)
WD40 163..574 CDD:225201 108/546 (20%)
WD40 repeat 174..217 CDD:293791 13/42 (31%)
WD40 repeat 270..318 CDD:293791 15/88 (17%)
WD40 repeat 323..370 CDD:293791 14/79 (18%)
WD40 repeat 414..462 CDD:293791 15/72 (21%)
WD40 repeat 468..511 CDD:293791 9/43 (21%)
Eml5NP_001003402.2 HELP <5..47 CDD:281450 14/63 (22%)
WD40 48..474 CDD:225201 82/434 (19%)
WD40 57..353 CDD:295369 63/304 (21%)
WD 1 59..100 7/45 (16%)
WD40 repeat 64..104 CDD:293791 7/44 (16%)
WD 2 104..145 6/40 (15%)
WD40 repeat 110..148 CDD:293791 5/37 (14%)
WD 3 148..187 12/42 (29%)
WD40 repeat 153..201 CDD:293791 18/51 (35%)
WD 4 195..233 8/37 (22%)
WD40 repeat 203..233 CDD:293791 6/29 (21%)
WD 5 235..273 10/37 (27%)
WD40 repeat 240..273 CDD:293791 8/32 (25%)
WD 6 280..321 3/40 (8%)
WD40 repeat 286..321 CDD:293791 3/34 (9%)
WD40 321..592 CDD:295369 56/278 (20%)
WD 7 323..362 8/38 (21%)
WD40 repeat 328..352 CDD:293791 7/23 (30%)
WD 8 364..403 3/38 (8%)
WD40 repeat 369..401 CDD:293791 2/31 (6%)
WD 9 406..445 10/38 (26%)
WD40 408..845 CDD:225201 101/503 (20%)
WD40 repeat 411..451 CDD:293791 11/39 (28%)
WD 10 449..488 7/38 (18%)
WD40 repeat 522..560 CDD:293791 11/44 (25%)
WD 11 561..601 9/40 (23%)
HELP <671..714 CDD:281450 14/68 (21%)
WD40 720..1140 CDD:225201 26/119 (22%)
WD40 725..1063 CDD:295369 26/114 (23%)
WD 12 725..766 8/43 (19%)
WD40 repeat 730..769 CDD:293791 7/41 (17%)
WD 13 770..811 12/45 (27%)
WD40 repeat 775..852 CDD:293791 16/56 (29%)
WD 14 814..853 4/17 (24%)
WD40 repeat 857..900 CDD:293791
WD 15 861..900
WD40 895..1140 CDD:295369
WD 16 901..940
WD40 repeat 907..994 CDD:293791
WD40 repeat 941..992 CDD:293791
WD 17 996..1035
WD40 repeat 1001..1035 CDD:293791
WD 18 1038..1077
WD40 repeat 1043..1069 CDD:293791
WD 19 1080..1120
WD40 repeat 1085..1110 CDD:293791
WD40 repeat 1128..1166 CDD:293791
WD40 repeat 1178..1236 CDD:293791
WD 20 1236..1276
WD40 repeat 1241..1266 CDD:293791
HELP <1365..1409 CDD:281450
WD 21 1420..1471
WD40 1422..1814 CDD:225201
WD40 repeat 1426..1475 CDD:293791
WD40 1475..1778 CDD:295369
WD 22 1475..1516
WD40 repeat 1480..1518 CDD:293791
WD 23 1519..1558
WD40 repeat 1525..1566 CDD:293791
WD 24 1568..1606
WD40 repeat 1573..1605 CDD:293791
WD 25 1608..1654
WD40 repeat 1613..1676 CDD:293791
WD40 1697..1970 CDD:295369
WD 26 1699..1739
WD40 repeat 1705..1743 CDD:293791
WD 27 1741..1782
WD 28 1783..1822
WD40 1788..>1971 CDD:225201
WD40 repeat 1788..1821 CDD:293791
WD40 repeat 1834..1892 CDD:293791
WD 29 1895..1934
WD40 repeat 1900..1939 CDD:293791
WD 30 1940..1977
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2106
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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