DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34124 and Eml3

DIOPT Version :9

Sequence 1:NP_001036333.1 Gene:CG34124 / 4379887 FlyBaseID:FBgn0083960 Length:2003 Species:Drosophila melanogaster
Sequence 2:NP_659121.1 Gene:Eml3 / 225898 MGIID:2387612 Length:897 Species:Mus musculus


Alignment Length:887 Identity:168/887 - (18%)
Similarity:276/887 - (31%) Gaps:351/887 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PRDIVSVEHSFGY---DCKKLFNLVLVDSDTLVFASGNFLNYFSISRQEISFQETVY--GC---- 80
            |.:.:|::..:||   |.:         |:..|..||                |.||  .|    
Mouse   245 PPETLSLDWVYGYRGRDSR---------SNLFVLRSG----------------EVVYFIACVVVL 284

  Fly    81 -----------GVGFITKNEHPDYTNLFTVGENGAR-----------------PTVFIYEYPSLN 117
                       |.|......|.|......|..:|.|                 |.|.|::..:| 
Mouse   285 YRPGGGPGGPGGGGQRHYRGHTDCVRCLAVHPDGVRVASGQTAGVDKDGKPLQPVVHIWDSETL- 348

  Fly   118 VRVKLLNAAQNCFTAGSYNKTGELFASQAGYPDFI----------ITIWRWENAEVVLRAKSFQS 172
              :||.......|..|    .|.|..|.|....|:          :::|.......:...||...
Mouse   349 --LKLQEIGLGAFERG----VGALAFSAADQGAFLCVVDDSNEHMLSVWDCSRGVKLAEIKSTND 407

  Fly   173 DILFVHFSEHNPILLCSSGLSHIKFWKMANTFTG-------LKLKGDLGRFGKTDFSDIYAMYML 230
            .:|.|.||..:...:.:||.||:.||..:.. ||       .:.:|..|::.|..|  |.....|
Mouse   408 SVLAVGFSPRDSSCIVTSGKSHVHFWNWSGG-TGAPGNGLLARKQGVFGKYKKPKF--IPCFVFL 469

  Fly   231 QDENVISGSDWGNMLLWQAGLIKFEICRKGRKPCHTKPITRITMKNGEVTTVGMDGYVRVWYWET 295
            .|.::::|...||:|.|            ||....:|             |.|..|....  :..
Mouse   470 PDGDILTGDSEGNILTW------------GRSVSDSK-------------TPGRGGAKET--YTI 507

  Fly   296 VDLADPPEDDLFVEIDPIYEFKIADVELRCMQKIHPFDESDFTHYAQDG---NGGIWFCDINTYD 357
            |..|...|..:|.               .|:::              ||   :||          
Mouse   508 VAQAHAHEGSIFA---------------LCLRR--------------DGTVLSGG---------- 533

  Fly   358 VPQKPRKLYSCIGGKVLAAQMSPVSPHFLCMSESGKLFVYQYDEQRLILEKEFPAEGVDVIWLDT 422
              .:.|:|... |..::|.|.:.:..||..:              |.|      |||:       
Mouse   534 --GRDRRLVQW-GPGLVALQEAEIPEHFGAV--------------RAI------AEGL------- 568

  Fly   423 NISVKGTE-LVAAFKDGILRQMYLDLSNGERPKMTRVRAFKAHTSPITALTVSRNSSLLLTGSAD 486
                 |:| ||...|:.:||.   ||:.|..|      ..:.||..:..|....:.:..||...|
Mouse   569 -----GSELLVGTTKNALLRG---DLAQGFSP------VIQGHTDELWGLCTHPSQNRFLTCGHD 619

  Fly   487 KSIFIYQLSRDEHQM---VDMRPLGFVQFAAIPNCFYWHETEPTVVLVGCKSG-----DLYEYNI 543
            :.:.::  ..:.|.:   :|::..|.        |..:|.: ..||:||..:|     |.....|
Mouse   620 RQLCLW--DGEGHALAWSMDLKETGL--------CADFHPS-GAVVVVGLNTGRWLVLDTETREI 673

  Fly   544 RTEVTDHETYLS----------------------YNI----TENSR----MRHTKFASIKSRIRR 578
            .::|||....||                      |::    |::||    |.|:.|         
Mouse   674 VSDVTDGNEQLSVVRYSPDGLYLAIGSHDNMIYIYSVSSCGTKSSRFGRCMGHSSF--------- 729

  Fly   579 DIHRENVKKRKERKRERKMNEVEKLKKANPGLQIDIESALADSEPDEEEEPLHIPTVPNAIIW-- 641
                              :..::..|..|     .|.|...|.|               .:.|  
Mouse   730 ------------------ITHLDWSKDGN-----FIMSNSGDYE---------------ILYWDV 756

  Fly   642 --------LRYTLRDTIWVSMAGYDAGYIYELEFNAAEPTRATIIAEADDIEIHSYCIIDEFIIF 698
                    .||..||..|.:.......::|.:..:.::.|           :|:|.|        
Mouse   757 AGGCKLLRNRYESRDREWATYTCVLGFHVYGVWPDGSDGT-----------DINSLC-------- 802

  Fly   699 GLHNGRIRINRINPDNFTDLSEFRIYP---------MHDGLKGTIPKIDISYSGEHLLTI-GYDG 753
            ..||.|:   ....|:|..:..|: ||         |:.|....:..:..::...:|::: |.|.
Mouse   803 RSHNERV---VAVADDFCKVHLFQ-YPCARAKAPSRMYSGHGSHVTSVRFTHDDSYLVSLGGKDA 863

  Fly   754 NVFLHKWNGPKIVRNKVRDKLPPLPEGVTQIPDIEPEACSLE 795
            ::|  :|      |........|.|...::.|.:.| |.||:
Mouse   864 SIF--QW------RVLGAGSSGPAPATPSRTPSLSP-ASSLD 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34124NP_001036333.1 WD40 repeat 90..124 CDD:293791 11/50 (22%)
WD40 repeat 131..166 CDD:293791 7/44 (16%)
WD40 135..493 CDD:295369 76/378 (20%)
WD40 163..574 CDD:225201 94/459 (20%)
WD40 repeat 174..217 CDD:293791 14/49 (29%)
WD40 repeat 270..318 CDD:293791 7/47 (15%)
WD40 repeat 323..370 CDD:293791 7/49 (14%)
WD40 repeat 414..462 CDD:293791 12/48 (25%)
WD40 repeat 468..511 CDD:293791 7/45 (16%)
Eml3NP_659121.1 TD_EMAP3 6..>34 CDD:409270
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..210
HELP 216..285 CDD:397490 13/64 (20%)
WD 1 235..287 13/66 (20%)
WD 2 296..345 10/48 (21%)
WD40 300..626 CDD:421866 89/447 (20%)
WD40 repeat 309..356 CDD:293791 9/49 (18%)
WD 3 351..393 9/45 (20%)
WD40 repeat 364..403 CDD:293791 6/38 (16%)
WD 4 399..435 12/35 (34%)
WD40 repeat 409..457 CDD:293791 14/48 (29%)
WD 5 449..488 12/52 (23%)
WD40 repeat 464..513 CDD:293791 15/75 (20%)
WD 6 505..544 11/80 (14%)
WD40 repeat 518..556 CDD:293791 11/79 (14%)
WD 7 550..585 15/69 (22%)
WD40 552..869 CDD:421866 80/446 (18%)
WD40 repeat 562..596 CDD:293791 16/60 (27%)
WD 8 590..627 7/44 (16%)
WD40 repeat 601..635 CDD:293791 5/35 (14%)
WD 9 630..668 10/46 (22%)
WD40 repeat 643..678 CDD:293791 9/43 (21%)
WD 10 675..710 6/34 (18%)
WD40 repeat 684..724 CDD:293791 6/39 (15%)
WD 11 717..756 12/85 (14%)
WD40 repeat 730..756 CDD:293791 7/45 (16%)
WD 12 766..824 16/80 (20%)
WD40 repeat 799..837 CDD:293791 11/49 (22%)
WD 13 831..870 7/46 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 875..897 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2106
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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