DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34124 and cfap44

DIOPT Version :9

Sequence 1:NP_001036333.1 Gene:CG34124 / 4379887 FlyBaseID:FBgn0083960 Length:2003 Species:Drosophila melanogaster
Sequence 2:XP_017209920.2 Gene:cfap44 / 108182240 -ID:- Length:1753 Species:Danio rerio


Alignment Length:1780 Identity:490/1780 - (27%)
Similarity:805/1780 - (45%) Gaps:177/1780 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EELENENDVS----FPRDIVSVEHSFGYDCKKLFNLVLVDSDTLVFASGNFLNYFSISRQEISFQ 74
            |||.:...|:    .|:|::.:.|.|||:|.:..||.|:|..||::.:||.|....::.:...:.
Zfish    46 EELRSRASVTEHSHLPQDLLQLSHVFGYECGRRANLQLLDEHTLLYIAGNLLVLLDVNTRGQRYI 110

  Fly    75 ETVYGCGVGFITKNEHPDYTNLFTVGENGARPTVFIYEYPSLNVRVKLLNAAQNCFTAGSYNKTG 139
            .:..|||:|.|..:....|   |.|.|.|.:|.:.|||||||.....|.......::...::..|
Zfish   111 RSCSGCGIGAIMTHPSRQY---FAVAEKGRQPNIIIYEYPSLRPYRILRGGTGVAYSCVCFSADG 172

  Fly   140 ELFASQAGYPDFIITIWRWENAEVVLRAKSFQSDILFVHFSEHNPILLCSSGLSHIKFWKMANTF 204
            .|.||....||:.:|:|.|.:....||.|:|..|:..|.|..:....|.:.|..||:||.:|:||
Zfish   173 SLLASVGSAPDYTLTLWDWRSERATLRKKAFSQDVHRVSFCANGTGQLTTCGSGHIRFWNLASTF 237

  Fly   205 TGLKLKGDLGRFGKTDFSDIYAMYMLQDENVISGSDWGNMLLWQAGLIKFEICRKGRKPCHTKPI 269
            |||||:|.||.||||..:||.....|.|..|:|||.|||:|||.|||:|.||||:|.:.||:..:
Zfish   238 TGLKLEGLLGSFGKTTVTDIEGYVELPDGKVVSGSAWGNLLLWDAGLVKVEICRRGGRVCHSGAV 302

  Fly   270 TRITMKNGEVTTVGMDGYVRVWYWETVDLADPPEDDLFVEIDPIYEFKIA-DVELRCMQKIHPFD 333
            .:|:::..|:.|||.||.||.|..|:||.||..:|....||:|:.|..:. :|.|.|:.:   ..
Zfish   303 QQISVEEEELITVGSDGAVRSWSLESVDAADAADDSGVCEIEPMNELLVGRNVSLVCVVR---SP 364

  Fly   334 ESDFTHYAQDGNGGIWFCDINTYDVPQKPRKLYSCIGGKVLAAQMSPVSPHFLCMSESGKLFVYQ 398
            ||.. .:|||.:|.||..|::..::.|.|..:.....|.|....:|..|......:....:.|:.
Zfish   365 ESSI-WFAQDAHGCIWKLDLSFSNMTQDPECVCCFHAGPVQGMDVSKSSHLMATTALDCSVRVFD 428

  Fly   399 YDEQRLILEKEFPAEGVDVIWLDTNISVKGTELVAAFKDGILRQMYLDLSNGERPKMTRV----- 458
            ...:|.:....|...|..:.|  .:.:|.|..|...|:||::|.:.|....|......||     
Zfish   429 VLSKRELTMSRFRQGGTTLTW--ASDAVGGGLLAVGFEDGVVRLLELYNPQGLHAVAGRVHSGDA 491

  Fly   459 -----RAFKAHTSPITALTVSRNSSLLLTGSADKSIFIYQLSRDEHQMVDMRPLGFVQFAAIPNC 518
                 .|.|.|.:.:.|:|.......|.|||||.::|.:.:. |.:     ||||||........
Zfish   492 ELRLTHALKPHNAAVHAVTFDSTGHTLATGSADGTVFFFAVG-DSY-----RPLGFVCVPGPVRS 550

  Fly   519 FYW----HETEPTVVLVGCKSGDLYEYNIRTEVTDHETYL---SYNITENSRMRHTKFASIKSRI 576
            ..|    ||.  :.:||.|..|.:.|  :::...|  |.:   |:.:|....| |..|:||||||
Zfish   551 LQWAPPTHEM--STLLVFCADGHVVE--LQSPAAD--TQICGNSFQLTALPTM-HFCFSSIKSRI 608

  Fly   577 RRDIHRENVKKRKERKRERKMNEVE---KLKKANPGLQIDIESALADSEPDEEEE---PLHIPTV 635
            :||   |.|..|:.|..||:..:.|   |||:.||...   |..|.:.|.:||||   ||:.|:.
Zfish   609 KRD---EAVALRQARTAERQKQQQERLRKLKEQNPDAS---EEELQEEEEEEEEEELPPLYTPSP 667

  Fly   636 PNAIIWLRYTLRDTIWVSMAGYDAGYIYELEFN----------AAEPTRATII--AEADDIEIHS 688
            |:.::...|......|:||.|:|:|::|..:|:          ..||.....:  :|.:.|...|
Zfish   668 PSPLLCGFYCAAGEFWLSMGGFDSGFLYRCQFSEDQSLDPAERRDEPLSFIPVQDSELNPITSIS 732

  Fly   689 YCIIDEFIIFGLHNGRIRINRINPDNFTDLSEFRIYPMHDGLKGTIPKIDISYSGEHLLTIGYDG 753
            :....:.::.|:.:|.||:......:...|..|....:||...|.:..:..|:....:|:.|.||
Zfish   733 FSSSGQLLVCGMQDGSIRVYPAQDLHQGSLQAFWALSVHDNSSGRVRHVHFSFDDTFVLSAGDDG 797

  Fly   754 NVFLHKWNGPKIVRNKVRDKLPPLPEGV---TQIPDIE-PEACSLEQEKINAELRRQQEAADAHD 814
            |:|.......:.:.......:|....|:   ..:.||| |.|.|:|..|...||.|....|:...
Zfish   798 NIFSFSCMTEQQIHTHTHATVPSPRAGLELEKAVQDIEDPSAYSIETAKQKLELERVCAEAERRK 862

  Fly   815 RDVLSKIGALQNVYFDIIRINEELPPGLRAKDTDLLLDDRITRQIRNELQAELDDVREDLAYDLE 879
            :...:::..||..:.::::.|:.||...|...::..||....:|:..:.:..:.:||.:||:..|
Zfish   863 QQRRARLEELQRSFQELLKENQRLPQHTRLHRSEFELDPLFLQQLEMQTEQRVQEVRRELAWGEE 927

  Fly   880 FAQVGHTKLYNHFLKELVQVPFTVAPLRANVPGVSTFRLQALGEEHAQIKQDI---EDRLKREHD 941
            ..::|.:||.|.|.:.:||...||...|:. ..:|::||.||...|..:....   |..|::|| 
Zfish   928 EQRIGLSKLQNMFWESVVQDTLTVFACRSG-HKISSYRLLALPFTHTHLSSQSSPEEAELRQEH- 990

  Fly   942 MGLHDYVAPERSDESIGEPPPESFFFGRDPKSIEPRFSKKMMRLLTRY-RKRQIFEVRRIFDWDK 1005
              .|.:  ...|..|:.:..|:....|....:     .|:..|...:. |.|:..:.|| ..|.:
Zfish   991 --THPH--KHHSSTSLQDEGPQVSSAGTHTHT-----QKQSSRAAEKVERAREQIQTRR-QQWAE 1045

  Fly  1006 LERQKPDPNRNHPDDDAQIEDAKRNLGDFKLKIGSDYE-PKSSE-TLTQKYIEVVECREQYFAMV 1068
            |...||..:...|.|...|..|:.||||.|||...|:. |:... .:.:|..:::|...:.|...
Zfish  1046 LYASKPSEDYEDPQDVEGIRAARENLGDCKLKSAEDFTVPEHLRMNVEKKRAQLLELERKIFEQK 1110

  Fly  1069 DAFNQMVLDLRERKGELDQFITAKRNRLAVIHNYLPEPDRQPLDPIQEIDMDLEYPELNLIEHYT 1133
            ...|..||.||::|..|...:.|:..:|..:...||....:|| |...:.:..|.||..  ..||
Zfish  1111 SEMNLRVLALRDQKVALLSELQAQVEQLQAVQQTLPLQKHRPL-PALPVLLPAEVPERR--HRYT 1172

  Fly  1134 PGCGVEIDDILTLEHSVDQVIARMAPMRSTANVSLFSLHGLDVPELH-EHTAFTMLQISKLNRSL 1197
            ..         |||        |...:|......:..|  |:..:.| |....|..|.:......
Zfish  1173 RA---------TLE--------RFNTLRLQEEQDILEL--LEAQDTHTEEDTHTQSQDTHAVEDT 1218

  Fly  1198 PNAELDEELLKLPPKSDPAYFELNDDGQVPYMMETRHRWLRQLLVEQNAIRTEVDEEVRQFDKAL 1262
            .:.:  |||..|             :.|:..|.|.|...|::.|:      |::.:.|.:||..|
Zfish  1219 HSQQ--EELTLL-------------EEQMREMEEARGLNLQEQLL------TQMQDSVCRFDAEL 1262

  Fly  1263 -----EKLQVRRFHVKMDAEFMTAFMNSLNQELYILRDSEEIETQLLLNAKTAMSTRNDLQMVIN 1322
                 ||.|:.......|...:|.|     :||.:|||.::.|.:|....:|.....:|:|..:.
Zfish  1263 CVLRHEKQQLDVSLKLADLRHVTLF-----EELLLLRDFQKREEKLTERLRTYRQEEDDIQGRMR 1322

  Fly  1323 STNRQLDELRRNIDKLGEQIVALQVLFATTV-KGHKFFDFLRRIFKKKWRPPK-----VSRGDDE 1381
            ...||::..:|::.:|..:..::...|.|:: :..:|.:||.|:||||.|..|     .::..|:
Zfish  1323 ECQRQMELRKRDVQRLQNREKSISTSFQTSLGENQRFEEFLTRVFKKKIRRTKKKETHTAQDGDQ 1387

  Fly  1382 SSSSSSSSSSSSEDEQADNKSLDSLDMTTIRLDEATCPTGLDRSLYDLAFSMRSDRHDLERNVRE 1446
            |.....|...|.||..|:::...........||:..||...|.:|::....:|..|.|:|..:::
Zfish  1388 SEDEEDSDEDSDEDSDAEDEDDYEESEAGAALDDTVCPPNCDAALFENTLRLRDLRVDVEEQLQD 1452

  Fly  1447 LTREVENKRKEIAEMQIKMKFHEEVYQREKNALLQFRRNRQQEVNKVHISAILRMDQLQHFYDGD 1511
            ..:.::..:|:...:..|.|..:...:...:.|....|.:||.:|:|.:...||:.||:...:|.
Zfish  1453 QMKTLDTLKKDYDTLSKKEKLVQGSRRSADSDLELLNREKQQRLNEVDVVLPLRLHQLECGSEGL 1517

  Fly  1512 DYRDLSKAILFDADMLVDLRRRADQLSEETLATKRWHRINFIHLRRMN-------TDIKFMRFEI 1569
            ...||..|::..|..|..|:.|..:|.:|    |...|:.:.|.|:.:       ||::      
Zfish  1518 QPADLQSALVLSAVELQRLQMRIRELQQE----KSQQRLQYRHARQQHRQLTPQLTDME------ 1572

  Fly  1570 TRL-EEEIR--QAMMKKFGIIVNLDELEEEVLRRYIFDLETNAEDELMALEKELLEKQKELARCE 1631
            ||: |.|:|  |.|:.|||.:|.|:.|:.....|.:.::.....:......:||...|.|:.:.:
Zfish  1573 TRIRESEVRCEQLMLLKFGKLVELEVLQTLAGNRKVEEMRQEVRERDARYTQELKHWQAEVVKAK 1637

  Fly  1632 EELVLETQNNTEKVNIMTVLREENNILRTLLDI-QNKNYAKWANPNALNLSYDIEKLRGIEKSLL 1695
            ..:....:.|||::..:..|..:...|...||. |.:...::|  ..|....::::|:.:.....
Zfish  1638 ACVTAVMKLNTERLQKINRLMTQKKTLDEELDCRQRRTVCQYA--GGLVDEQELQRLQQLISGQS 1700

  Fly  1696 DQIECLEREICALRLKS----KPLQ 1716
            ..|..|..||.||..|.    .||:
Zfish  1701 QDIAALNVEIQALSRKDGHILPPLE 1725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34124NP_001036333.1 WD40 repeat 90..124 CDD:293791 14/33 (42%)
WD40 repeat 131..166 CDD:293791 9/34 (26%)
WD40 135..493 CDD:295369 128/368 (35%)
WD40 163..574 CDD:225201 143/428 (33%)
WD40 repeat 174..217 CDD:293791 19/42 (45%)
WD40 repeat 270..318 CDD:293791 20/47 (43%)
WD40 repeat 323..370 CDD:293791 13/46 (28%)
WD40 repeat 414..462 CDD:293791 14/57 (25%)
WD40 repeat 468..511 CDD:293791 15/42 (36%)
cfap44XP_017209920.2 HELP <37..101 CDD:308837 20/54 (37%)
WD40 repeat 124..156 CDD:293791 13/34 (38%)
WD40 151..527 CDD:330360 128/381 (34%)
WD40 repeat 163..199 CDD:293791 9/35 (26%)
WD40 repeat 207..247 CDD:293791 17/39 (44%)
WD40 repeat 254..280 CDD:293791 12/25 (48%)
WD40 repeat 358..398 CDD:293791 12/43 (28%)
WD40 365..810 CDD:225201 126/466 (27%)
WD40 repeat 403..438 CDD:293791 5/34 (15%)
WD40 repeat 445..488 CDD:293791 12/44 (27%)
WD40 repeat 506..542 CDD:293791 14/41 (34%)
WD40 repeat 548..593 CDD:293791 11/50 (22%)
WD40 repeat 729..770 CDD:293791 7/40 (18%)
WD40 repeat 778..812 CDD:293791 7/33 (21%)
Neuromodulin_N <822..1352 CDD:331332 144/589 (24%)
SMC_N <1438..>1708 CDD:330553 64/281 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D50355at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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