DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34124 and eml3

DIOPT Version :9

Sequence 1:NP_001036333.1 Gene:CG34124 / 4379887 FlyBaseID:FBgn0083960 Length:2003 Species:Drosophila melanogaster
Sequence 2:XP_005172258.1 Gene:eml3 / 100533983 ZFINID:ZDB-GENE-110304-3 Length:976 Species:Danio rerio


Alignment Length:567 Identity:130/567 - (22%)
Similarity:211/567 - (37%) Gaps:147/567 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EELENENDVSFPRDIVSVEHSFGY---DCKKLFNLVLVDSDTLVFASGNFLNYFSISRQEISFQE 75
            |||:    :..|...:.::..:||   ||:.  ||.|:.|...|:.....:..:.||.|:.....
Zfish   337 EELK----MDLPSQKLDLDWVYGYRGRDCRA--NLYLLPSGEAVYFIACVVVLYHISNQKQRHYR 395

  Fly    76 TVYGCGVGFITKNEHPDYTNLFT-----VGENG--ARPTVFIYEYPSLNVRVKLLNAAQNCFTAG 133
            ....| |..:.  .|||...:.:     |.::|  .:|.|.|::..:|   |.|.......|..|
Zfish   396 KHTDC-VRCLA--IHPDKVRVASGQTAGVDKDGKPLQPFVHIWDSKTL---VTLQQIGLGIFERG 454

  Fly   134 SYNKTGELFASQAGYPDFI----------ITIWRW----ENAEVVLRAKSFQSDILFVHFS--EH 182
                .|.:..|.:....|:          :::|.|    :.|||    ||....:|.|.||  :.
Zfish   455 ----VGAIAFSNSDGGTFLCVIDDSNEHMLSVWDWNKNIKQAEV----KSTNEAVLAVDFSPTDT 511

  Fly   183 NPILLCSSGLSHIKFWKM-ANTFTGLKLKGDLGRFGKTDFSDIYAMYMLQDENVISGSDWGNMLL 246
            |.|:.|  |.||:.||.| |.|.|  |.:|..|::.|..|...:...:..|  |::|...||:|.
Zfish   512 NNIISC--GKSHVYFWTMSAGTMT--KKQGIFGKYKKPKFVLCFVFSLTGD--VLTGDSEGNILT 570

  Fly   247 WQAGLIKFEICRKGRKPCHTKPITRITMKN-GEVTTV------------GMDGYVRVWYWETVDL 298
            |.......:...||.|  .|..|.:.|..: |.|.|:            |.|..:..|   :.||
Zfish   571 WGKSAADIKTLGKGAK--ETFQIMKQTRAHEGSVFTMCILQGGAILSGGGKDRKIIRW---SADL 630

  Fly   299 ADPPEDDLFVEIDPIYEFKIADV---ELRCMQKIHPFDESDFTHYAQDGNGGIWFCDINTYDVPQ 360
            |...|.::..:...:.  .|||:   ||......:......|:    ||                
Zfish   631 APERECEIPEKFGAVR--TIADLDGEELLVGTTRNAILRGTFS----DG---------------- 673

  Fly   361 KPRKLYSCIGGKV-----LAAQMSPVSPHFLCMSESGKLFVYQYDEQRL----ILE-----KEFP 411
                ..:.:.|.|     ||..  |....|:......:|.|:..::.||    .||     .:|.
Zfish   674 ----FVAIVQGHVDEMWGLATH--PTQNIFVTCGNDRQLCVWNAEDHRLDWCTTLEDSGLCADFC 732

  Fly   412 AEGVDVI-------WLDTNISVKGTELVAAFKDG-----ILRQ---------------MYL-DLS 448
            ..|..|.       |:..::..|  |:||...||     ::|.               :|: .::
Zfish   733 PNGAVVSVGLSTARWVVLDLQTK--EVVADLIDGNEQLSVMRYSPDGSFLAVGSHDNFIYIYSVT 795

  Fly   449 NGERPKMTRVRAFKAHTSPITALTVSRNSSLLLTGSADKSIFIYQLS 495
            .|.| :.||......|:|.||.|..|::...:::.|.|..|..:.::
Zfish   796 EGGR-RYTRFGKCTGHSSFITHLDWSKDGKFIMSNSGDYEILYWDVA 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34124NP_001036333.1 WD40 repeat 90..124 CDD:293791 11/40 (28%)
WD40 repeat 131..166 CDD:293791 9/48 (19%)
WD40 135..493 CDD:295369 99/432 (23%)
WD40 163..574 CDD:225201 92/394 (23%)
WD40 repeat 174..217 CDD:293791 19/45 (42%)
WD40 repeat 270..318 CDD:293791 11/60 (18%)
WD40 repeat 323..370 CDD:293791 4/46 (9%)
WD40 repeat 414..462 CDD:293791 15/75 (20%)
WD40 repeat 468..511 CDD:293791 7/28 (25%)
eml3XP_005172258.1 SlyX 13..73 CDD:294687
HELP 315..385 CDD:281450 13/53 (25%)
WD40 repeat 402..450 CDD:293791 11/52 (21%)
WD40 repeat 455..495 CDD:293791 8/43 (19%)
WD40 repeat 501..540 CDD:293791 18/42 (43%)
WD40 repeat 549..597 CDD:293791 13/51 (25%)
WD40 596..956 CDD:225201 55/280 (20%)
WD40 596..953 CDD:295369 55/280 (20%)
WD40 repeat 646..680 CDD:293791 8/59 (14%)
WD40 repeat 685..723 CDD:293791 8/39 (21%)
WD40 repeat 727..762 CDD:293791 8/36 (22%)
WD40 repeat 768..806 CDD:293791 6/38 (16%)
WD40 repeat 814..840 CDD:293791 7/25 (28%)
WD40 repeat 882..921 CDD:293791
WD40 repeat 927..954 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2106
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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