DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34124 and eml6

DIOPT Version :9

Sequence 1:NP_001036333.1 Gene:CG34124 / 4379887 FlyBaseID:FBgn0083960 Length:2003 Species:Drosophila melanogaster
Sequence 2:XP_031758938.1 Gene:eml6 / 100498213 XenbaseID:XB-GENE-6039541 Length:2009 Species:Xenopus tropicalis


Alignment Length:937 Identity:184/937 - (19%)
Similarity:322/937 - (34%) Gaps:303/937 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DVSFPRDIVSVEHSFGY---DCKKLFNLVLVDSDTLVFASGNFLNYFSISRQEISFQETVYGCGV 82
            |.:.|...:.:|..:||   .|:          :.|.:.:|..:.||            |.|.||
 Frog     3 DRTAPACQLRLEWVYGYRGHQCR----------NNLYYTAGKEVVYF------------VAGVGV 45

  Fly    83 GFITKNE-----------------HPDYTNLFTVGENGARPTVFIYEYPSLNVR-VKLLNAAQNC 129
            .:.|:..                 |||.| |...|:.|..|.:.|::  |..|: |.:|......
 Frog    46 VYNTREHSQKFFLGHNDDIISLALHPDRT-LVATGQVGKDPYICIWD--SYTVQTVSILKDVHTH 107

  Fly   130 FTAG-SYNKTGELFASQAGYPDFIITIWRWENAEVVLRAKSFQSDILFVHFSEHNPILLCSSGLS 193
            ..|| :::..|:..||........:.||.|:..:|:..|......|..:.:..:.|..|.|.|:.
 Frog   108 GVAGLAFDSEGQRLASVGLDAKNTVCIWDWQKGKVLATATGHSDRIFDISWDPYQPNRLVSCGVK 172

  Fly   194 HIKFWKMANTFTGLKLKGDLGRFGKT-DFSDIYAMYMLQDENVISGSDWGNMLLWQ--------- 248
            |||||    |..|..|....|.|||| |...|..:...:::...||:..|::.:|:         
 Frog   173 HIKFW----TLCGNALTAKRGIFGKTGDLQTILCLACAKEDVTYSGALNGDIYVWKGLTLARTIQ 233

  Fly   249 ----AGLIKFEICRK-----GRKPC------HTKPITRITMKNGEVTTVG--------------- 283
                ||:.....|.:     ||..|      ..|.||:|.::..|....|               
 Frog   234 GAHSAGIFSMYACEEGFATGGRDGCIRLWDADFKAITKIDLRESEQGYKGLSIRSVCWKADRILA 298

  Fly   284 ---------------------MDGYVRVWYWETV-----DLADPPEDDLFVEIDPIYEFKIADVE 322
                                 |.|:.....|...     .||....||..|.:     :.:||..
 Frog   299 GTQDSEIFEVMVRERDKPMLIMQGHCEGELWALALHPKKPLAVTGSDDRSVRL-----WSLADHA 358

  Fly   323 L--RC-----------------------------------MQKIHPFDESDFTH---YAQDG--- 344
            |  ||                                   .:.:|..|..:..|   ::.||   
 Frog   359 LIARCNMEEAVRSVAFISDGSQLALGMKDGSFTVLRVRDMTEVVHIKDRKEVIHEMKFSPDGSYL 423

  Fly   345 ----NGGIWFCDINTYDVPQKPRKLYSCIGGKVLAAQMS-PVSPHFLCMSESG--KLFVYQYDEQ 402
                |.|:    |:.|.|.|:.:|...|.........:. .|..::|..::..  :||......:
 Frog   424 AVGSNDGL----IDVYAVAQRYKKTGECNKSSSFITHLDWSVDSNYLQTNDGAGERLFYKMPSGK 484

  Fly   403 RLILEKEFPA---------EGVDV--IW-----------LDTNIS----VKGTE--LVAAFKDGI 439
            .|..:.|..|         .|.:|  ||           :|.|.|    |.|.:  ||..|:...
 Frog   485 HLTNKDEIKAIHWFSWTCVVGPEVSGIWPKYTDITDINSVDANFSSTAAVTGDDFGLVKLFRFPS 549

  Fly   440 LRQMYLDLSNGERPKMTRVRAFKAHTSPITALTVSRNSS-LLLTGSADKSIFIYQLSRD--EHQM 501
            |:            |..:.|.:..|::.:|.:..|.:.. :|.||.||.|:|.::...:  .:.:
 Frog   550 LK------------KGAKFRKYVGHSAHVTNVRWSHDCQWVLSTGGADHSVFQWRFIPEGVTNGV 602

  Fly   502 VDMRPLGFVQFAAIPNCFYWHETEPTVVLVGCKSGDLYEYNIRTEVTDHETYLSYNITENSRMRH 566
            ::..|    |...|.:|.  .|::          .||.:........:.||.::|:         
 Frog   603 IETAP----QEGIIDSCS--DESD----------SDLSDVPELDSDIEQETQINYD--------- 642

  Fly   567 TKFASIKSRIRRDIHRENVKKRKERKRERKMNEVEKLKKANPGLQIDIESALADSEPDEEEEPLH 631
                       |.:::|::.:.|::.:| |...:..||:              :..|||.   |.
 Frog   643 -----------RQVYKEDLPQLKQQNKE-KQQSLPSLKR--------------EKAPDES---LK 678

  Fly   632 IPTVPNAIIWLRYTLRDTIWVSMAG---YDAGYIYELEFNAAEPTRATIIAEADDI---EIHSYC 690
            :..|..   :..|..|:.::.:.||   |....| .:.::..:.::...:...|||   .||.  
 Frog   679 LKFVHG---YRGYDCRNNLFYTQAGEVVYHVAAI-AVVYDRLQHSQRFYLGHDDDILSLAIHP-- 737

  Fly   691 IIDEFIIFGLHNGRIRINRINPDNFTDLSEFRIYPMHDGLKGT----IPKIDISYSGEHLLTIGY 751
             :.:::..|      ::.|....:..|....:...:   |||.    :..:|.|..|:.|:::|.
 Frog   738 -VKDYVATG------QVGRDAAIHVWDTQTLKCLSL---LKGQHQRGVSALDFSADGKCLVSVGL 792

  Fly   752 DGNVFLHKWN---GPKIVRNK-VRDKL 774
            |.|..:..|:   |.||...: .:||:
 Frog   793 DDNHTIVYWDWKKGEKIACTRGHKDKI 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34124NP_001036333.1 WD40 repeat 90..124 CDD:293791 12/34 (35%)
WD40 repeat 131..166 CDD:293791 9/35 (26%)
WD40 135..493 CDD:295369 102/502 (20%)
WD40 163..574 CDD:225201 106/557 (19%)
WD40 repeat 174..217 CDD:293791 14/42 (33%)
WD40 repeat 270..318 CDD:293791 12/88 (14%)
WD40 repeat 323..370 CDD:293791 16/93 (17%)
WD40 repeat 414..462 CDD:293791 15/66 (23%)
WD40 repeat 468..511 CDD:293791 10/45 (22%)
eml6XP_031758938.1 HELP <2..48 CDD:397490 14/66 (21%)
WD40 57..353 CDD:421866 67/307 (22%)
WD40 repeat 64..103 CDD:293791 13/41 (32%)
WD40 repeat 110..148 CDD:293791 10/37 (27%)
WD40 repeat 153..191 CDD:293791 14/41 (34%)
WD40 repeat 199..233 CDD:293791 5/33 (15%)
WD40 208..591 CDD:225201 74/403 (18%)
WD40 repeat 240..275 CDD:293791 8/34 (24%)
WD40 repeat 286..321 CDD:293791 0/34 (0%)
WD40 repeat 328..352 CDD:293791 6/28 (21%)
WD40 repeat 369..401 CDD:293791 0/31 (0%)
WD40 repeat 410..449 CDD:293791 11/42 (26%)
WD40 repeat 521..560 CDD:293791 11/50 (22%)
HELP <671..714 CDD:397490 11/49 (22%)
WD40 725..1066 CDD:238121 24/107 (22%)
WD40 repeat 730..768 CDD:293791 6/49 (12%)
WD40 repeat 775..816 CDD:293791 11/40 (28%)
WD40 repeat 822..861 CDD:293791
WD40 repeat 866..898 CDD:293791
WD40 repeat 910..994 CDD:293791
WD40 repeat 941..992 CDD:293791
WD40 969..1266 CDD:421866
WD40 repeat 1001..1041 CDD:293791
WD40 repeat 1044..1080 CDD:293791
WD40 repeat 1085..1122 CDD:293791
WD40 repeat 1129..1174 CDD:293791
WD40 repeat 1196..1235 CDD:293791
WD40 repeat 1241..1268 CDD:293791
HELP <1405..1445 CDD:397490
WD40 1441..1881 CDD:225201
WD40 repeat 1517..1555 CDD:293791
WD40 repeat 1560..1602 CDD:293791
WD40 repeat 1610..1642 CDD:293791
WD40 repeat 1649..1692 CDD:293791
WD40 repeat 1741..1778 CDD:293791
WD40 repeat 1782..1819 CDD:293791
WD40 repeat 1824..1860 CDD:293791
WD40 repeat 1870..1916 CDD:293791
WD40 repeat 1936..1973 CDD:293791
WD40 1967..2006 CDD:197651
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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