DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lobo and Drc7

DIOPT Version :10

Sequence 1:NP_001036757.1 Gene:lobo / 4379864 FlyBaseID:FBgn0083946 Length:897 Species:Drosophila melanogaster
Sequence 2:NP_001099639.1 Gene:Drc7 / 291853 RGDID:1565601 Length:874 Species:Rattus norvegicus


Alignment Length:922 Identity:278/922 - (30%)
Similarity:437/922 - (47%) Gaps:126/922 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KFKEIDEQRRSQGSE-SDFADEMEGEFEA-EMEEMG--SSEFSLSEGEPSLNIGKIDLSFPETVE 84
            |.:|.:|..|.:.:| ::.|::.|...:| |:.:.|  .|:..|.:.|..|.  .|::..|.   
  Rat     7 KVEEEEEAEREEAAERAERAEKAERVLKATEVSKEGIILSQDDLRDLEEKLM--AIEIPTPA--- 66

  Fly    85 EFENSPQC--------YPPSYYTLSPKERLLLLYAENFRKQLVLSYPKRRAMVLALPNECKVQKF 141
              ::|..|        .||||.|.|.||..|||.|:||.:|.....|.|..:.|...|||.|.||
  Rat    67 --DHSVICQVPVDVTKLPPSYTTNSLKEEHLLLVADNFSRQYSHLCPDRVPLFLHPLNECNVPKF 129

  Fly   142 VCTTIRPTAFIYTQLISSVEEIAKFVADFIQYEPLQDPINLPNRLISPETLLRKRKGNSYEMATL 206
            |.||:|||...|.:|. :.:..|:||:||:...||.||:..|..|.|..|:|:.:|||.::.:||
  Rat   130 VSTTLRPTLMPYPELY-NWDSCAQFVSDFLTMVPLVDPLKPPTHLYSSTTVLQCQKGNCFDFSTL 193

  Fly   207 LVSMLIGAGHPALVVSGVAREETILNDQLAVPYPYPIVEVEVEEVKPKVEKPG-QKYKLRGLPDL 270
            |.|||||:|:.|..|:|....:..|.|......|   :.|:.:|:..|.||.. :||.::...||
  Rat   194 LCSMLIGSGYDAYCVNGYGSLDLCLMDLTREVCP---LTVKAKEIVAKKEKVAPKKYAVKPPRDL 255

  Fly   271 KSHLEEDMAEVHRQ--KEAEEKRIQDEIIRKQMEDLELLAVDRYHYRRSHAWVVIINNAPWSVKP 333
            .|..|::..|...|  |:.|.||:::|  .:::.:.|....|..|..|.|:||::::..      
  Rat   256 TSRFEQEQEEKRLQAIKDQELKRLKEE--EERLLEAEKAKPDPLHGLRVHSWVLVLSGK------ 312

  Fly   334 KTTYTDVNGDVVEAPPTAIFIEPSTGFICETGCKQYILVDSIWNEYNYYV--------CKQKHQR 390
                        ...|.:.||:|.||....|....::.::|:||..||::        ||     
  Rat   313 ------------REVPESFFIDPFTGRSYGTKDDHFLGIESLWNHKNYWINMQDCWNCCK----- 360

  Fly   391 VSELRWDLRDTKDWEHMLPG-EPPEMRIYKMASDENVADEERD----ISEEKHLDCIGSWVERLH 450
              :|.:||.|...||:||.| :.|.:.:.. ..||.:.|:|.:    ..|:|..|...|||.::.
  Rat   361 --DLIFDLGDPVRWEYMLLGTDKPHLSLTD-DDDEGLDDDEDEDQGKEEEDKSFDMPPSWVAQIE 422

  Fly   451 IGLADFEQRFPSSEKKIQYKGAIHERFSPYSQRDGKVMQLTIFNNDECTIPKVRYEYYENRSDL- 514
            |...:||.|.||.:|.||||.|..|::|||...:|.|.:||.:.:.:||......|:|:||.|: 
  Rat   423 ITPEEFETRCPSGKKVIQYKKAQLEKWSPYLNNNGLVCRLTTYEDLQCTKVLEIKEWYQNREDML 487

  Fly   515 -MRHVKYTYATDQFEEIFNKGRNDSLKSIEYFSD-PSQQRKVHFFSASRIDSLELMVVEPGSLIL 577
             ::|:..|  |....:.|..|...:|....|.|. |...|.:.|:...|:|.|......|.::..
  Rat   488 ELKHINKT--TGLHVDYFKPGHPQALCVHSYKSMLPEMDRVMEFYKMIRVDGLVKREETPMTMTE 550

  Fly   578 HYKDRSDKCWYKEFEFTPAGNVLK------------KVTEKFLKASANDVCSNDIATRTFLFQQN 630
            :|:.|||...|:...|.|....|.            |:||:|.: :.......|:|.|.||..:.
  Rat   551 YYQGRSDFLSYRHINFGPRVKKLTQNSADSNPRPVVKITEQFFR-NPEKPADEDVAERVFLIAEE 614

  Fly   631 KIVLKFHYTFGALTATVVEFTKPPRPD-YGKELIYDEKLTKIYKANPLDPTRTNLELYRLLCEQL 694
            :|.|::|.....:||...||.:....| .|.::|...::...|:..|::.|:      :||   .
  Rat   615 RIQLRYHCRDDYITANKREFLRRTEVDSKGNKIIMTPEMCISYEVEPMEHTK------KLL---Y 670

  Fly   695 QYED--HLRKNFEKIFE--------DINNVFDLRKSEKAEPKLKFSIFDPLRNGAARAIR--MRQ 747
            |||.  || ||.||:..        ::..:..||:.|:....|..||:|..||..::..|  |.:
  Rat   671 QYETMIHL-KNEEKLSRHQAWESELEVLEILKLREEEEEAHTLTISIYDTKRNEKSKEYREAMER 734

  Fly   748 FEEEEELKKEIASKPADFLAPYLVPYKHQEELTPEQSQNAYNACLNDLKSRFVSLLNNLQRHYED 812
            ...||.|::..|.  .|:|||:|......|:||..|:....:.||:|.|.|.:...|.:|..:|.
  Rat   735 VLHEEHLRQVEAQ--LDYLAPFLAQLPPGEKLTRWQAVRLKDECLSDFKQRLIDKANLIQARFEK 797

  Fly   813 LTSESKSLNRFLNKFENQFNNYDYKRLVQQSKDLELNK--------RMVQQRLTLTHEESQKKYE 869
            .|.|.:...::..  |||..      |..:.:||.|:.        |:::|||....|.:..||.
  Rat   798 ETQELQKKQQWYQ--ENQVT------LTPEDEDLYLSYCSQAMFRIRILEQRLNRHKELAPLKYL 854

  Fly   870 VVKNSLLKDPRL 881
            .::..|.|||||
  Rat   855 ALEEKLYKDPRL 866

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loboNP_001036757.1 YebA <160..228 CDD:440916 29/67 (43%)
Drc7NP_001099639.1 Transglut_core <174..>215 CDD:450180 18/40 (45%)
PRK10246 <686..>868 CDD:182330 54/191 (28%)

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