DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-VI and nphs1

DIOPT Version :10

Sequence 1:NP_001036705.1 Gene:side-VI / 4379854 FlyBaseID:FBgn0083950 Length:1087 Species:Drosophila melanogaster
Sequence 2:XP_073779348.1 Gene:nphs1 / 692352 ZFINID:ZDB-GENE-051102-1 Length:1287 Species:Danio rerio


Alignment Length:925 Identity:203/925 - (21%)
Similarity:325/925 - (35%) Gaps:309/925 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 THKEPAELIINPVKEKDAG-NFRCRVDFKLSQTRNSNV---NLEVVVPPTQ-------PIIFNER 153
            |||         |..:|.| :.:|....|  .||.|:|   .|.|..||.:       |.:|   
Zfish   439 THK---------VSREDNGLSLQCEAFNK--GTRFSSVRAAELIVYYPPQKVWLDAPPPNVF--- 489

  Fly   154 RLRIDSRAGPYEEGGSLEVTCVVYGGSPPPTVIWLMNGQLQNSVVDYTYDGAINSKLVVRNLSR- 217
                      ...|.:|.:.|...||:|...:.||.|    |.|| .|....::|:   |.:|| 
Zfish   490 ----------LHSGSTLRLVCFSSGGNPTGQLTWLKN----NKVV-LTASKQVSSE---RGVSRE 536

  Fly   218 ----IHQH---AVYTCQASNFHKKYVATNITIDLYLRPLLVEISFNNQPMSADRKYEIECQAIGS 275
                :|..   |.|.|.:||..||.::|.....:....:.|:|....:.:...:..:::|.|..|
Zfish   537 LLLILHPSDNLATYRCDSSNKAKKVLSTQTKFRVLFPAVSVKIVAKQKELRRGQTLDLDCLAGSS 601

  Fly   276 RPPAKITWWMGNLELHGHSQ--KVSEDGNVS-TSVLSITPTREDHGKALSCRATNELVRNGIRET 337
            .|.|.|:|.:|.:.|.|..|  |.:|.|.:| ||.||:|.......|.::|:|.:.::..|: ..
Zfish   602 NPTANISWSLGPVILKGVDQAPKRAEFGGMSRTSKLSLTLESHHWRKRITCQAFSNVLSEGV-NN 665

  Fly   338 AMKLNVFFIP----------------TLQLDLGSNLNPEDI------------------------ 362
            ...|:|.|.|                |..|....:.||::|                        
Zfish   666 FYSLDVLFPPEFSDEQPDEVQVIEDETATLPAKVSANPDEITCEWIFQGEKLVKERDPRYTFSDW 730

  Fly   363 ---------EEGDDVYFECK----------------------------------------VHANP 378
                     .:|.|...||.                                        ..|||
Zfish   731 TLEIVNVSRRDGGDYIIECSNAEGSNRTKLRLDVQYSPTVRMKSDPVFVNIGDTADLLCVADANP 795

  Fly   379 AAYKVV-WK-----HNHQIIQHNQRAGVIVSSGDLALQGVTRHQAGNYTCTASN-------VEGD 430
            ....:. ||     ...::.:.::..|    :|.|.:..|||.:||.|.|||.|       ||| 
Zfish   796 ITSSMFSWKWMGEGERDELGEESEDDG----TGVLTIYEVTRDRAGVYQCTADNGISPTGSVEG- 855

  Fly   431 GDSNVVELKVMYKPICR--PDQKKI--YGVARNEAAEIVCEVDAFPPPENFKWSFNNTAETFDMP 491
                  :|.|.:.|..:  |..:|:  .|...|: |.:||:....|..: |:|:.|.    |.:.
Zfish   856 ------QLIVRFAPDLQKGPQWRKVASRGDGSND-ANVVCQAQGVPRVQ-FRWAKNG----FPLD 908

  Fly   492 QSGFRPHSAQGSTLT-YTPV-------KEMDFGTIMCWADNNVGQQKEPCVFHLIAAGKPEAPTN 548
            ....|......||.| :|.:       ..:|:....|.|.|::|:  :.....|::...|:.|::
Zfish   909 LGNPRYEETTESTGTIHTSILTVINVSAALDYAIFTCTAHNSMGE--DSLDIQLLSTNHPDPPSD 971

  Fly   549 CTV--VNQTSDSLEVYCIEGFDGGMRQWFLMEIFDQHSGQLQANISAKF----------AALSVT 601
            ..:  |:|||.:||  .:.|||||:.|.|.:..  |.:|      ||.:          ...:||
Zfish   972 LKLLRVDQTSVTLE--WMPGFDGGLTQIFRVRY--QWAG------SASYMYVDVFPPTATVYTVT 1026

  Fly   602 GLDAGRLFRIYVYAVNGRGRS--------------DAIALDGYTLKAAEKQTVA---LTSYKGSA 649
            ||:...::...|.|:|..|.|              ||...||....|.:...:|   |..|    
Zfish  1027 GLNPSTMYNFSVNALNSIGESSYADNNKILMVTTADAKEADGGVSTADQDSALAGGGLPVY---- 1087

  Fly   650 QSPDNFELTPILSIGIFVGILVAIVCIGIGTIAALKLR------------SHKHQQQQKFVHPNA 702
                   :..||.:|..:.:|...:|.   .:|..|.|            ..|.::|:.....:.
Zfish  1088 -------VVVILVVGGVLFLLNPFICF---LLARWKRRRSLKGDTSSISQETKSEEQRSTASSST 1142

  Fly   703 KFSRPGNLQ-------IKDKISLP---------------------------LSHSE--EMYDEK- 730
            :::....:.       :.|..|.|                           .:|.|  |.||.: 
Zfish  1143 RYASRELINASAQRTLLVDSSSEPDSSVYESYGRQENPHYYYPTEAYSPALYAHPEGPEDYDGRH 1207

  Fly   731 --NPDVVPYNEVDGEYK--QKSATQTPSGHLSTTSEVEISCKPGSTSGTG--------IVQANSA 783
              :|....|.||.|.|:  |..:...|:.|:...:       |.||...|        .|...:.
Zfish  1208 GTSPFTHVYEEVRGMYEDLQACSPLPPAAHIHPQA-------PFSTYYEGRAYSKADVDVTIGAY 1265

  Fly   784 DSGTYQSSKDDELHY 798
            ||..|:..:|.:|.:
Zfish  1266 DSMVYRRRRDTDLPF 1280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VINP_001036705.1 IG_like 35..140 CDD:214653 13/43 (30%)
Ig_3 165..230 CDD:464046 21/72 (29%)
Ig 262..343 CDD:472250 25/83 (30%)
Ig strand B 266..270 CDD:409416 0/3 (0%)
Ig strand C 280..284 CDD:409416 1/3 (33%)
Ig strand F 320..325 CDD:409416 1/4 (25%)
Ig strand G 336..339 CDD:409416 0/2 (0%)
Ig_3 358..426 CDD:464046 24/146 (16%)
Ig_3 456..524 CDD:464046 17/75 (23%)
FN3 545..622 CDD:473895 26/88 (30%)
nphs1XP_073779348.1 None

Return to query results.
Submit another query.