DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-VI and CNTN2

DIOPT Version :10

Sequence 1:NP_001036705.1 Gene:side-VI / 4379854 FlyBaseID:FBgn0083950 Length:1087 Species:Drosophila melanogaster
Sequence 2:XP_047285058.1 Gene:CNTN2 / 6900 HGNCID:2172 Length:1187 Species:Homo sapiens


Alignment Length:1055 Identity:234/1055 - (22%)
Similarity:348/1055 - (32%) Gaps:284/1055 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 ADDKVLLVVWYKNNLPIYSYDTRGAHA-------GTP---SHWRDEEVLEDRAVFRTHKEPAELI 108
            |:|..|.....|...|..:|...|...       |.|   ..||  :|....:...|..||. |.
Human   231 AEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWR--KVDGSLSPQWTTAEPT-LQ 292

  Fly   109 INPVKEKDAGNFRCRVDFKLSQTRNSNVNLEVVVPPTQPIIFNERRLRI--DSRAGPYEEGGSLE 171
            |..|..:|.|.:.|..:   :......|...::| ..||     ..|::  |:.|   :.|.:|.
Human   293 IPSVSFEDEGTYECEAE---NSKGRDTVQGRIIV-QAQP-----EWLKVISDTEA---DIGSNLR 345

  Fly   172 VTCVVYGGSPPPTVIWLMNGQ---LQNSVVDYTYDGAINSKLVVRNLSRIHQHAVYTCQASNFHK 233
            ..|.. .|.|.|||.||.||:   .||.|.....|... |||      .:....:|.|.|.|.|.
Human   346 WGCAA-AGKPRPTVRWLRNGEPLASQNRVEVLAGDLRF-SKL------SLEDSGMYQCVAENKHG 402

  Fly   234 K-YVATNITI-----DLYLRPLLVEISFNNQPMSADRKYEIECQAIGSRPPAKITWWMGNLELHG 292
            . |.:..:.:     |..|.|:...|     |.:...:..|.||. .:.|.|.:.|..|...|  
Human   403 TIYASAELAVQALAPDFRLNPVRRLI-----PAARGGEILIPCQP-RAAPKAVVLWSKGTEIL-- 459

  Fly   293 HSQKVSEDGNVSTSVLSITP---------TREDHGKALSCRATNELVR---NGIRETAMKLNVFF 345
                      |::|.:::||         :|.|.|| .:|.|.|.:.:   .||........:..
Human   460 ----------VNSSRVTVTPDGTLIIRNISRSDEGK-YTCFAENFMGKANSTGILSVRDATKITL 513

  Fly   346 IPTLQLDLGSNLNPEDIEEGDDVYFECKVHANPAA-YKVVWKHNHQIIQ------HNQRAGVIVS 403
            .|          :..||..||::..:|....:|.. ....|..:...|.      |.:|..|..:
Human   514 AP----------SSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKET 568

  Fly   404 SGDLALQGVTRHQAGNYTCTASNVEGDGDSNVVELKVMYK-PICRPDQKKIYGVARNEAAEIVCE 467
            .|||.:........|.|||.|..|.   ||...|..|:.: |...|.     ||...:..:...:
Human   569 IGDLTILNAQLRHGGKYTCMAQTVV---DSASKEATVLVRGPPGPPG-----GVVVRDIGDTTIQ 625

  Fly   468 VDAFPPPENFKWS--FNN-------TAETFDMPQSGFR-----PHSAQGS-----TLTYTPVKEM 513
            :         .||  |:|       |.:....|...::     |.:.:|:     .|..||..:.
Human   626 L---------SWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIEGNAETAQVLGLTPWMDY 681

  Fly   514 DFGTIMCWADNNVG-------------QQKEPCVFHLIAAGKPEAPTNCTVVNQTSDSLEVYCIE 565
            :|..|   |.|.:|             ::..|.|.....:|...||.. .:||.|..|.|....:
Human   682 EFRVI---ASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGE-LIVNWTPMSREYQNGD 742

  Fly   566 GFDGGMRQWFLMEIFDQHSGQLQA----NISAKFAALSVTGLDAGRLFRIYVYAVNGRGRSDAIA 626
            ||.      :|:....|.|...|.    ...|::...|...:.....|.:.:.:.|.||.... :
Human   743 GFG------YLLSFRRQGSTHWQTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPE-S 800

  Fly   627 LDGYTLKAAEKQTVALTSY--KGSAQSPDNFELTPILS--IGIFVGILVAIVCIGIGTIAALKLR 687
            |......|.|:..||.|..  ||.:.|..|....|:..  .||.:|..:.....|....||.::|
Human   801 LTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEAAADRVR 865

  Fly   688 SHKHQQQQKF--VHPNAKF-----------------------------SRPGNLQIKDKISLPLS 721
            :.......:.  :|||.|:                             ..|||:.        .:
Human   866 TAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPRRPPGNIS--------WT 922

  Fly   722 HSEEMYDEKNPDVVPY-NE--VDGEYK---QKSATQTPSGHLSTTSEVEISCKPGSTSGTGIVQA 780
            .|......|...|||: ||  |.| ||   |.....||:.||:..:.:||...  ...|..:||.
Human   923 FSSSSLSIKWDPVVPFRNESAVTG-YKMLYQNDLHLTPTLHLTGKNWIEIPVP--EDIGHALVQI 984

  Fly   781 NSADSGTYQSSKDDELHYAELSLTNMPSGSSGASKKGQPMGGVGVVQHVVQQ-----QQQQQQGQ 840
            .                      |..|.|.           |:....|:|:.     .......:
Human   985 R----------------------TTGPGGD-----------GIPAEVHIVRNGGAAPPLPLSPRE 1016

  Fly   841 VQHPHQLLGGTLPHGSSMRKLLPTIPATATLQRHKPNAGGMQ---HPHQHAPPPTYDYDYFEEPT 902
            :|.|.:.|.|:.|         |. |...:.::.|..||..|   .....:|||.|         
Human  1017 IQDPPRYLRGSFP---------PR-PTPISTRKGKWKAGRNQVQSSLRTASPPPFY--------- 1062

  Fly   903 IYAQIDAYKTM-QVDTGVVVAGVGAGAGSGVNGAGASISSPGSHGTPSTVSPGTVQMYTLPQHPG 966
                 .|.:|. :...|..|.|......:..||..::: ..|....||...|| :|: .|.:|.|
Human  1063 -----PAPRTSPRAREGRRVQGEAEDQPAIANGLQSTV-GVGLRRPPSRPLPG-LQL-ALHKHDG 1119

  Fly   967 GYHTLP------HNH 975
            |.|..|      |.|
Human  1120 GEHGSPPSTTPWHRH 1134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VINP_001036705.1 IG_like 35..140 CDD:214653 22/95 (23%)
Ig_3 165..230 CDD:464046 22/67 (33%)
Ig 262..343 CDD:472250 21/92 (23%)
Ig strand B 266..270 CDD:409416 1/3 (33%)
Ig strand C 280..284 CDD:409416 0/3 (0%)
Ig strand F 320..325 CDD:409416 1/4 (25%)
Ig strand G 336..339 CDD:409416 0/2 (0%)
Ig_3 358..426 CDD:464046 19/74 (26%)
Ig_3 456..524 CDD:464046 15/86 (17%)
FN3 545..622 CDD:473895 19/80 (24%)
CNTN2XP_047285058.1 IgI_1_Contactin-2 35..131 CDD:409437
Ig strand A 38..42 CDD:409437
Ig strand A' 45..50 CDD:409437
Ig strand B 56..64 CDD:409437
Ig strand C 69..75 CDD:409437
Ig strand C' 77..80 CDD:409437
Ig strand D 87..91 CDD:409437
Ig strand E 93..99 CDD:409437
Ig strand F 106..115 CDD:409437
Ig strand G 118..131 CDD:409437
Ig2_Contactin-2-like 139..228 CDD:409392
Ig strand A 141..146 CDD:409392
Ig strand B 150..156 CDD:409392
Ig strand C 164..170 CDD:409392
Ig strand C' 175..177 CDD:409392
Ig strand D 182..187 CDD:409392
Ig strand E 190..194 CDD:409392
Ig strand F 204..212 CDD:409392
Ig strand G 216..228 CDD:409392
Ig 239..324 CDD:472250 20/91 (22%)
Ig strand B 257..261 CDD:409353 0/3 (0%)
Ig strand C 270..274 CDD:409353 0/3 (0%)
Ig strand E 289..293 CDD:409353 2/4 (50%)
Ig strand F 303..308 CDD:409353 1/4 (25%)
Ig strand G 316..319 CDD:409353 1/2 (50%)
Ig4_Contactin-2-like 328..412 CDD:143205 28/94 (30%)
Ig strand A 328..331 CDD:143205 0/2 (0%)
Ig strand A' 335..339 CDD:143205 2/6 (33%)
Ig strand B 343..351 CDD:143205 2/8 (25%)
Ig strand C 357..362 CDD:143205 3/4 (75%)
Ig strand C' 364..367 CDD:143205 1/2 (50%)
Ig strand D 372..376 CDD:143205 1/3 (33%)
Ig strand E 378..383 CDD:143205 1/5 (20%)
Ig strand F 392..399 CDD:143205 3/6 (50%)
Ig strand G 403..412 CDD:143205 1/8 (13%)
Ig5_Contactin 417..505 CDD:409358 26/106 (25%)
Ig strand A 417..422 CDD:409358 1/4 (25%)
Ig strand A' 425..430 CDD:409358 1/9 (11%)
Ig strand B 434..441 CDD:409358 1/6 (17%)
Ig strand C 449..453 CDD:409358 0/3 (0%)
Ig strand D 467..470 CDD:409358 1/2 (50%)
Ig strand E 471..476 CDD:409358 0/4 (0%)
Ig strand F 484..492 CDD:409358 4/8 (50%)
Ig strand G 498..505 CDD:409358 2/6 (33%)
Ig6_Contactin-2 507..603 CDD:409440 24/108 (22%)
Ig strand A 507..513 CDD:409440 0/5 (0%)
Ig strand A' 516..521 CDD:409440 1/4 (25%)
Ig strand B 524..532 CDD:409440 2/7 (29%)
Ig strand C 541..545 CDD:409440 0/3 (0%)
Ig strand D 566..569 CDD:409440 0/2 (0%)
Ig strand E 570..574 CDD:409440 3/3 (100%)
Ig strand F 583..590 CDD:409440 4/6 (67%)
Ig strand G 597..601 CDD:409440 1/3 (33%)
FN3 618..705 CDD:238020 16/98 (16%)
FN3 726..800 CDD:238020 17/81 (21%)
FN3 815..907 CDD:238020 18/91 (20%)
PHA03247 <989..1184 CDD:223021 41/184 (22%)
Blue background indicates that the domain is not in the aligned region.

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