DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment side-VI and sc:d0202

DIOPT Version :9

Sequence 1:	NP_001036705.1	Gene:	side-VI / 4379854	FlyBaseID:	FBgn0083950	Length:	1087	Species:	Drosophila melanogaster
Sequence 2:	NP_001091722.2	Gene:	sc:d0202 / 569842	ZFINID:	ZDB-GENE-080226-9	Length:	292	Species:	Danio rerio

Alignment Length:	240	Identity:	66/240 - (27%)
Similarity:	96/240 - (40%)	Gaps:	33/240 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   208 SKLVVRNLSRIHQHAVYT--CQASNFHKKYVATNITIDLYLRPLLVEISFNNQPMSADRKYEIEC 270
            :.|:...:|.:....:||  |.. |:.|:.....:.:.:|..|..|.||..|..|.....||:.|
Zfish    71 ASLITWRVSELTDWDIYTPFCYI-NYDKQQCVVALPVTVYKTPDSVSISTVNLTMIEGNLYELLC 134

  Fly   271 QAIGSRPPAKIT--WWMGN--LELHGHSQKVSEDGNVSTSVLSITPTREDHGKALSCRATNELVR 331
            ......|..|:|  |:.|.  ::....:.......| .||.|.|.|.|.|.|....|.|...|..
Zfish   135 DVHNVAPVQKLTVNWYKGETLVDQTNFTDTTKSPVN-KTSKLLIRPDRADDGAQYRCEAELNLGD 198

  Fly   332 NG------IRETAMKLNVFFIPTLQLDLGSNLNPEDIEEGDDVYFECKVHANPAAYKVVWKHNHQ 390
            .|      :...:..:.|.:.|.      .:.:.|.|.:.|||...|.|.|||||. ..|...|.
Zfish   199 EGPQHPPTVTSKSFSIKVHYKPK------HSRSTEKISQSDDVSLNCTVKANPAAV-YTWHSKHL 256

  Fly   391 IIQHNQRAGVIVSSGDLALQGVTRHQAGNYTCTASNVEGDGDSNV 435
            |   .:.:..::.|..|:        .|||||||:|..|: ||.|
Zfish   257 I---EKISSSVIQSSTLS--------PGNYTCTAANYLGE-DSKV 289

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
side-VI	NP_001036705.1	IG_like	35..140	CDD:214653
		Ig_3	157..230	CDD:290638	5/23 (22%)
		IG_like	165..242	CDD:214653	7/35 (20%)
		Ig	265..343	CDD:299845	21/87 (24%)
		IG_like	267..343	CDD:214653	20/85 (24%)
		IG_like	363..440	CDD:214653	27/73 (37%)
		IGc2	364..429	CDD:197706	23/64 (36%)
		IG_like	456..532	CDD:214653
		Ig_3	456..524	CDD:290638
		fn3	545..622	CDD:278470
sc:d0202	NP_001091722.2	Ig	112..211	CDD:325142	27/99 (27%)
sc:d0202	NP_001091722.2	Ig_2	219..292	CDD:316418	30/90 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910