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Protein Alignment side-VI and side-IV

DIOPT Version :10

Sequence 1:	NP_001036705.1	Gene:	side-VI / 4379854	FlyBaseID:	FBgn0083950	Length:	1087	Species:	Drosophila melanogaster
Sequence 2:	NP_001034052.2	Gene:	side-IV / 41657	FlyBaseID:	FBgn0038156	Length:	1001	Species:	Drosophila melanogaster

Alignment Length:	213	Identity:	40/213 - (18%)
Similarity:	73/213 - (34%)	Gaps:	64/213 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    99 FANHSGTDILPYFSENVEKCVQ-------------------------NQFNSTCNEYKEESCVTR 138
            |..:...|::|...:||.|.|.                         .:.....||....|.::|
  Fly   674 FERNEQDDVVPLAEKNVRKAVTRLGGTMPKGQRIDAYLDSMRRVDSWKESTDADNEGAGSSSLSR 738

  Fly   139 ---NEMLDD------------------NGADIFGLQLAYKLMEKYLSGRLE----ERIERLNVTQ 178
               |:.||.                  :|.::|..|:..||.::..:..|:    :..:....::
  Fly   739 TVSNDSLDTLPLPDSMNSSTYVKMHPASGENVFLRQIRSKLKKRSETPELDHIDSDTADETTKSE 803

  Fly   179 EQLFFYSFANQFCSGSLSKVFIEEEGDYDPH-SVNNVRVNAVAQHPGFRKAFNCPDNSRMMKSA- 241
            :..|          |||:|..|:......|. |.|:.||:.|...|....:.:...:|:...|:
  Fly   804 KSPF----------GSLNKSSIKYPIKNAPEFSENHSRVSPVPVPPSRNASVSVRPDSKAEDSSD 858

  Fly   242 --TEQCIIYGENAPETRK 257
              |:...::|.....|||
  Fly   859 ETTKDVGMWGPKHAVTRK 876

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.