| Sequence 1: | NP_001036705.1 | Gene: | side-VI / 4379854 | FlyBaseID: | FBgn0083950 | Length: | 1087 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001399746.1 | Gene: | Cadm3 / 360882 | RGDID: | 1307035 | Length: | 430 | Species: | Rattus norvegicus |
| Alignment Length: | 397 | Identity: | 90/397 - (22%) |
|---|---|---|---|
| Similarity: | 154/397 - (38%) | Gaps: | 113/397 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 72 SYDTRGAHAGTPSHWRDEEV-------LEDRAVFRTHKEPAELIIN----PVKEKD---AGN--- 119
Fly 120 FRCRV-DFKLSQTRNSNVNLEVVVPPTQPIIFNERRLRIDSR-----AGPYEEGGSL-------- 170
Fly 171 -EVTCVVYGGSPPPTVIWLMNGQLQNSVVDYTYDGAINSKLVVRNLSRIHQHAVYTCQASNFHKK 234
Fly 235 YVATNITIDLYLRPLLVEISFNNQPMSADRKYEIECQAIGSRPPAKITWWMGNLELHGHSQKVSE 299
Fly 300 DGN-----VSTSVLSITPTREDHGKALSCRATNELVRNGIRETAMKLNVFFIPTLQLDLGSNLNP 359
Fly 360 EDIEEGDDVYFECKVHANPAAYKVVW--KHNHQIIQHNQRAGVIVSSGDLALQGVTRHQAGNYTC 422
Fly 423 TASNVEG 429 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| side-VI | NP_001036705.1 | IG_like | 35..140 | CDD:214653 | 18/85 (21%) |
| Ig_3 | 165..230 | CDD:464046 | 13/73 (18%) | ||
| Ig | 262..343 | CDD:472250 | 28/85 (33%) | ||
| Ig strand B | 266..270 | CDD:409416 | 0/3 (0%) | ||
| Ig strand C | 280..284 | CDD:409416 | 0/3 (0%) | ||
| Ig strand F | 320..325 | CDD:409416 | 1/4 (25%) | ||
| Ig strand G | 336..339 | CDD:409416 | 1/2 (50%) | ||
| Ig_3 | 358..426 | CDD:464046 | 15/69 (22%) | ||
| Ig_3 | 456..524 | CDD:464046 | |||
| FN3 | 545..622 | CDD:473895 | |||
| Cadm3 | NP_001399746.1 | IgV_1_Necl-1 | 64..158 | CDD:143290 | 26/124 (21%) |
| Ig strand A | 64..67 | CDD:143290 | 1/2 (50%) | ||
| FR1 | 65..83 | CDD:143290 | 3/17 (18%) | ||
| Ig strand A' | 68..74 | CDD:143290 | 0/5 (0%) | ||
| Ig strand B | 76..84 | CDD:143290 | 1/7 (14%) | ||
| CDR1 | 84..89 | CDD:143290 | 2/4 (50%) | ||
| FR2 | 90..97 | CDD:143290 | 3/13 (23%) | ||
| Ig strand C | 90..96 | CDD:143290 | 1/5 (20%) | ||
| CDR2 | 98..109 | CDD:143290 | 3/10 (30%) | ||
| Ig strand C' | 100..104 | CDD:143290 | 1/3 (33%) | ||
| Ig strand C' | 106..109 | CDD:143290 | 1/2 (50%) | ||
| FR3 | 110..145 | CDD:143290 | 8/34 (24%) | ||
| Ig strand D | 114..121 | CDD:143290 | 1/6 (17%) | ||
| Ig strand E | 124..130 | CDD:143290 | 2/5 (40%) | ||
| Ig strand F | 137..145 | CDD:143290 | 3/7 (43%) | ||
| CDR3 | 146..149 | CDD:143290 | 0/2 (0%) | ||
| Ig strand G | 149..158 | CDD:143290 | 3/31 (10%) | ||
| FR4 | 151..158 | CDD:143290 | 3/29 (10%) | ||
| Ig | 159..261 | CDD:472250 | 36/132 (27%) | ||
| Ig strand B | 180..184 | CDD:409353 | 2/32 (6%) | ||
| Ig strand C | 194..198 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 224..228 | CDD:409353 | 2/4 (50%) | ||
| Ig strand F | 238..243 | CDD:409353 | 1/4 (25%) | ||
| Ig strand G | 254..257 | CDD:409353 | 1/2 (50%) | ||
| IG_like | 271..348 | CDD:214653 | 16/75 (21%) | ||
| Ig strand B | 282..286 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 296..300 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 314..318 | CDD:409353 | 1/10 (10%) | ||
| Ig strand F | 328..333 | CDD:409353 | 2/4 (50%) | ||
| 4.1m | 386..401 | CDD:128590 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||