| Sequence 1: | NP_001036705.1 | Gene: | side-VI / 4379854 | FlyBaseID: | FBgn0083950 | Length: | 1087 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001093946.1 | Gene: | Nectin1 / 192183 | RGDID: | 620791 | Length: | 515 | Species: | Rattus norvegicus |
| Alignment Length: | 439 | Identity: | 92/439 - (20%) |
|---|---|---|---|
| Similarity: | 141/439 - (32%) | Gaps: | 144/439 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 28 FKPDGEILRVLVNSSAQ--------IKCDVGSSQADDKVLLVVWY------KNNLPIYSYDTRGA 78
Fly 79 HAGTPSHWRDEEVLEDRAVFRTHKEPAELIINPVKEKDAGNFRCRVDFKLSQTRNSNVNLEVVVP 143
Fly 144 PTQPIIFNERRLRIDSRAGPYEEGGSLEVTCVVYGGSPPPTVIWLMNGQLQNSVVDYTYDGAINS 208
Fly 209 KLVVRNLSRIHQHAVYTCQASNFHKKYVATNITIDLYLRPLLVEISFNNQPMSADRKYEIECQAI 273
Fly 274 GSRPPAKITWWMGNLELHGHSQKVSEDGNVSTSVLS---ITPTREDHGKALSCRATNELVRNGIR 335
Fly 336 ETAMKLNVFFIPTLQLDLGSNLNPEDIEEGDDVYFECKVHANPAAYKVVWKHNHQIIQHNQRAGV 400
Fly 401 IVSSGDLALQGVTRHQ-AGNYTCTASNV----EGDGDSNVVELKVMYKP 444 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| side-VI | NP_001036705.1 | IG_like | 35..140 | CDD:214653 | 25/118 (21%) |
| Ig_3 | 165..230 | CDD:464046 | 9/64 (14%) | ||
| Ig | 262..343 | CDD:472250 | 21/83 (25%) | ||
| Ig strand B | 266..270 | CDD:409416 | 1/3 (33%) | ||
| Ig strand C | 280..284 | CDD:409416 | 0/3 (0%) | ||
| Ig strand F | 320..325 | CDD:409416 | 2/4 (50%) | ||
| Ig strand G | 336..339 | CDD:409416 | 1/2 (50%) | ||
| Ig_3 | 358..426 | CDD:464046 | 18/68 (26%) | ||
| Ig_3 | 456..524 | CDD:464046 | |||
| FN3 | 545..622 | CDD:473895 | |||
| Nectin1 | NP_001093946.1 | IgV_1_Nectin-1_like | 31..143 | CDD:409469 | 25/119 (21%) |
| FR1 | 31..54 | CDD:409469 | 5/22 (23%) | ||
| Ig strand A | 31..35 | CDD:409469 | 1/3 (33%) | ||
| Ig strand A' | 37..41 | CDD:409469 | 1/3 (33%) | ||
| Ig strand B | 46..54 | CDD:409469 | 1/7 (14%) | ||
| CDR1 | 55..62 | CDD:409469 | 0/6 (0%) | ||
| FR2 | 63..69 | CDD:409469 | 2/5 (40%) | ||
| Ig strand C | 64..69 | CDD:409469 | 2/4 (50%) | ||
| CDR2 | 70..89 | CDD:409469 | 6/19 (32%) | ||
| Ig strand C' | 79..84 | CDD:409469 | 2/5 (40%) | ||
| Ig strand C' | 86..90 | CDD:409469 | 1/4 (25%) | ||
| FR3 | 90..128 | CDD:409469 | 7/43 (16%) | ||
| Ig strand D | 97..101 | CDD:409469 | 1/3 (33%) | ||
| Ig strand E | 106..113 | CDD:409469 | 1/12 (8%) | ||
| Ig strand F | 120..128 | CDD:409469 | 2/7 (29%) | ||
| CDR3 | 129..132 | CDD:409469 | 0/2 (0%) | ||
| Ig strand G | 132..142 | CDD:409469 | 4/9 (44%) | ||
| FR4 | 133..143 | CDD:409469 | 4/9 (44%) | ||
| IgC1_2_Nectin-1_like | 146..243 | CDD:143298 | 37/201 (18%) | ||
| Ig strand A | 146..152 | CDD:143298 | 3/5 (60%) | ||
| Ig strand B | 168..175 | CDD:143298 | 3/6 (50%) | ||
| Ig strand C | 180..186 | CDD:143298 | 3/24 (13%) | ||
| Ig strand C' | 188..190 | CDD:143298 | 1/55 (2%) | ||
| Ig strand D | 191..199 | CDD:143298 | 4/9 (44%) | ||
| Ig strand E | 205..213 | CDD:143298 | 2/7 (29%) | ||
| Ig strand F | 223..230 | CDD:143298 | 2/6 (33%) | ||
| Ig strand G | 234..240 | CDD:143298 | 3/8 (38%) | ||
| Ig | 247..333 | CDD:472250 | 21/92 (23%) | ||
| Ig strand B | 265..269 | CDD:409353 | 1/3 (33%) | ||
| Ig strand C | 279..283 | CDD:409353 | 1/7 (14%) | ||
| Ig strand E | 298..302 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 313..318 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 330..333 | CDD:409353 | 0/2 (0%) | ||
| TM_EGFR-like | 353..382 | CDD:213052 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||